Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1909 ATGGATGAAAAGAAGCAGCTTAAGAAAGAGAATGGTGTATTGACCTTTGAGCTCTCAGCCATGACAAGGAAGTGTAAGGAGCTACTTGAGTTGGCCATTGTTGAAGCCATGGAAGGTGAGAAAGTTGTTCATATCATCGATCTGAACCAGCTTAATGGGTTTATAAATCTTCTTAATACTATGAAAGAACGCCAGAAAAACCCACCATTTCTGAAGATCACAGGGATCCATGAGAAGAAAGAGATTTGGGATCAAATGGGATATCAACTAACCAGAGAAGCAAAGAAGTTGAAGTTCCATTTCCAGTTTAGAACCATTGTTATCAGATTGGATAATCTGGATATTGAAAGCTTGCCTGTAGTTTCAGGAGAAGCGCTTTCAATAAGCTCTGTGCTTCAGCTTCTTGCTCTTCTCGCAACTGATGATAATGAAGATTGGGTGATCAGCAAGAACTCACTGGCATAA 465 0.4 MDEKKQLKKENGVLTFELSAMTRKCKELLELAIVEAMEGEKVVHIIDLNQLNGFINLLNTMKERQKNPPFLKITGIHEKKEIWDQMGYQLTREAKKLKFHFQFRTIVIRLDNLDIESLPVVSGEALSISSVLQLLALLATDDNEDWVISKNSLA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1909 154 ProSiteProfiles GRAS family profile. 1 154 IPR005202 -
Glsi04g1909 154 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 138 IPR005202 -
Glsi04g1909 154 Pfam GRAS domain family 30 141 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1909 Glsi-ChrGlsi04 68627720 68628724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1909 14 143 GRAS Transcription Factor Family AT1G50420 46.970 3.66e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi04g1909 GRAS 1.9e-25 CL0063