Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1905 ATGGAGAGGCTCAATTTTAAGGACGCAATTATAGACAAAGACAATGACCTATTCAAGAAAGTTCACGGAATGCCCATGTACCAATACACAGATCCAACATGGAATCACATTTTCAACAAAGCAATGGCCAATGTTTGCAATATGGAGATGATAAGGATACTTGAAATTTACAAAGGATTTGAGGGATTATCAACACTGGTTGATGTGGAAGGTGGCTCTGGGCAAAATCTGAAGTTGATAGTCTCCAAGTACTCTTCAATAAAGGGTATTAATTTTGATTTGCCCCAAGTGATTCAAAATGCACCATCGCATGAAGGGATTGAGCTTATTGGAGGAGATATGTTTGTAGGAGTTCCAAAAGGTGATGCCGTAATATTAAAGCAATTGCGCCAACAGAGGAAGCCAAGTTCGTTTGCAGCATTAACCAAGAAAGTGTACGAGACTTTGTGCAAACGCTCTGGATTTTCTGGTTTCAAAGTTGCTTGCCGTGCTTTCTCTGTTTTAGGAGGTTTAGTGGAGATTGGAGATGATGATCTAGTCATTCTCCATCAAGGGGCCACCAAAGAAGGAAAAGTTGACAAGGTAATGGGAGAAGGAAAAGTCCGAGATGATGAGGACCTTAGGGATGGTGTAAGAAAGGAGAATGAGGGCATGAACCAAGCAGAGGTGGTTGGCACAGAGGAGGGTATTGCACATAAAAGTGATGTTGAAAAGAGAAAAAGGTATAAGGTCGGCAAAAAAGCTAGCCAAGAAAGGTGCTAA 762 0.4134 MERLNFKDAIIDKDNDLFKKVHGMPMYQYTDPTWNHIFNKAMANVCNMEMIRILEIYKGFEGLSTLVDVEGGSGQNLKLIVSKYSSIKGINFDLPQVIQNAPSHEGIELIGGDMFVGVPKGDAVILKQLRQQRKPSSFAALTKKVYETLCKRSGFSGFKVACRAFSVLGGLVEIGDDDLVILHQGATKEGKVDKVMGEGKVRDDEDLRDGVRKENEGMNQAEVVGTEEGIAHKSDVEKRKRYKVGKKASQERC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1905 253 MobiDBLite consensus disorder prediction 203 230 - -
Glsi04g1905 253 PANTHER O-METHYLTRANSFERASE 6 149 IPR016461 GO:0008168
Glsi04g1905 253 Pfam O-methyltransferase domain 6 150 IPR001077 GO:0008171
Glsi04g1905 253 Gene3D Vaccinia Virus protein VP39 35 128 IPR029063 -
Glsi04g1905 253 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 162 IPR029063 -
Glsi04g1905 253 Gene3D - 19 53 IPR036388 -
Glsi04g1905 253 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 235 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1905 Glsi-ChrGlsi04 68570960 68579443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1905 5 149 Monolignol Biosynthesis Gene Families AT5G54160 52.381 1.72e-45 154