Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1904 ATGCTGCTATGCACTAGCCAGGTCTATTCTGCAGTTTTAAATGCTGCAGTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAAATGGAAAATTGATGTCAGCCTCTGAGATTGCTTCTCAGCTTCCAGCTCCTTCACAGCACGAAGAACTGCCTTTCAGGATTGATAGGATGCTGCGTCTGCTTGCTAGTCACAATCTTCTTACTTTTTCTTATGGTACAAATGAAGATCGGAGGACTGAAAGACTCTATGGCCTTTCACCCGCTGGGAAATATTTGTCAATGATGAAAATGCTGGCTTATATATATTTTCAACATTTCTGTGTCATCGAGTGCTTAAGGATGCTCGGTCTTCCAAAAGGGGATGCCATAATAGTAAAGGTGATCGTTGTGGAAATCATAATGCCTGAAGCAATTGCCCCAACAGAGGAAGCCAAGTTCGTTTCCAGCATTGACAACCTCATGTTTCTTCATGATAGCAAAGAGAGAACTGAGAAAGAGTATGAGACTTTGTGCAAACGCTCTGGCTTTTCTAGTTTCAAAGTTGCCTGCGGTGCCTTCTCTGTCTTAGGGGTGATGGAATTTTACTAA 591 0.423 MLLCTSQVYSAVLNAAVELNLFEIIAKENGKLMSASEIASQLPAPSQHEELPFRIDRMLRLLASHNLLTFSYGTNEDRRTERLYGLSPAGKYLSMMKMLAYIYFQHFCVIECLRMLGLPKGDAIIVKVIVVEIIMPEAIAPTEEAKFVSSIDNLMFLHDSKERTEKEYETLCKRSGFSSFKVACGAFSVLGVMEFY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1904 196 Gene3D - 1 93 IPR036388 -
Glsi04g1904 196 PANTHER O-METHYLTRANSFERASE 5 95 IPR016461 GO:0008168
Glsi04g1904 196 Pfam Dimerisation domain 12 63 IPR012967 GO:0046983
Glsi04g1904 196 Gene3D Vaccinia Virus protein VP39 127 184 IPR029063 -
Glsi04g1904 196 FunFam Caffeic acid 3-O-methyltransferase 1 93 - -
Glsi04g1904 196 SUPERFAMILY "Winged helix" DNA-binding domain 3 93 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1904 Glsi-ChrGlsi04 68555970 68558642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1904 1 94 Monolignol Biosynthesis Gene Families AT5G54160 45.745 2.04e-16 74.3