Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1903 ATGCTGCTATGCACTAGCCAGGTCTATTCTGGAGTTTTAAATGCTTCAGTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGCAAATGGAAAATTGATGTCAGCCTCTGAGATTGCTTCTCAGCTTCCAACTCCATCGCAGCACCAAGAATTGCCTTCCAGGACTGATAGGATGCTGCGTCTGCTTGCTAGTCACGATCTTCTTACTTGTTCCTTTGGTACCAATGAAGATGGTGGGACTGAAAGACTCTATGGCCTTTCACCCGCTGGGAAATGCTTAGTTAATGGCGGAAATGGTGGCTTGTATATATTATCAAAATTTCTGTGTCATCGAGCAATTGTGGATGCTTGGTAA 354 0.4379 MLLCTSQVYSGVLNASVELNLFEIIAKANGKLMSASEIASQLPTPSQHQELPSRTDRMLRLLASHDLLTCSFGTNEDGGTERLYGLSPAGKCLVNGGNGGLYILSKFLCHRAIVDAW 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1903 117 Gene3D - 7 117 IPR036388 -
Glsi04g1903 117 PANTHER O-METHYLTRANSFERASE 7 97 IPR016461 GO:0008168
Glsi04g1903 117 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 117 IPR016461 GO:0008168
Glsi04g1903 117 FunFam Caffeic acid 3-O-methyltransferase 1 93 - -
Glsi04g1903 117 Pfam Dimerisation domain 12 63 IPR012967 GO:0046983
Glsi04g1903 117 SUPERFAMILY "Winged helix" DNA-binding domain 3 97 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1903 Glsi-ChrGlsi04 68519755 68520108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1903 1 99 Monolignol Biosynthesis Gene Families AT5G54160 45.455 6.52e-18 75.9