Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1898 ATGGCCAATGTTTGCAATATAGAGATGAAAAGGATACTTGAAATTTACAAAGGATTTGAGGGATTATCAACACTGGTTGATTTGGGGGGTGGCACTGGGCAAAATCTGAAGTTGATAGTCTCCAAGTACCCTTCAATAAAGGGTATTAATTTTGATTTGCCCCAAGTGATTCAAAATGCATCACCCCATGAAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAGGAGTTCCAAAAGGTGATGCCATAATATTAAAGGCTGTATGTCATAATTGGTCAGATGAAAATTGCATAAAAATATTGAGTAATTGCTGCGAAGCATTGGCAGAAAATGGGAAAGTGATCATTATGGAATTCATAATGCCTGAAGCAATTGCGCCAACAGAGGAAGCCAAGTTCGTTTGCAGCATTGACAACCTCATGTTTCTTCATGATGGCAAAGAGAGAACCGAGAAAGAGTACGAGACTTTGTGCAAACGCTCTGGATTTTCTGGTTTCAAAGTTGCTTGCCGTGCCTTCTCTGGTTCAGTAGAGATTGGAAATGATGATCTGATCATTCTCCATCAAGGGGCCGCCAAAGAAGGAAAAGTTGGAGATGATGAAGACCTTAGGGATGATGCAAGAAAGGAGAGGAAGGGCATGAACCAAGCAGAGGTGGTTGGCACAGAGGAGGGTATTGCACATAGAAGTGATGTTGAAAAGACAGAAAGATATAAGGTTGGCAAAAAAGTTAGCCAATAA 741 0.4116 MANVCNIEMKRILEIYKGFEGLSTLVDLGGGTGQNLKLIVSKYPSIKGINFDLPQVIQNASPHEGIEHVGGDMFAGVPKGDAIILKAVCHNWSDENCIKILSNCCEALAENGKVIIMEFIMPEAIAPTEEAKFVCSIDNLMFLHDGKERTEKEYETLCKRSGFSGFKVACRAFSGSVEIGNDDLIILHQGAAKEGKVGDDEDLRDDARKERKGMNQAEVVGTEEGIAHRSDVEKTERYKVGKKVSQ 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1898 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 170 IPR029063 -
Glsi04g1898 246 CDD AdoMet_MTases 24 121 - -
Glsi04g1898 246 PANTHER O-METHYLTRANSFERASE 1 166 IPR016461 GO:0008168
Glsi04g1898 246 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 189 IPR016461 GO:0008168
Glsi04g1898 246 Gene3D Vaccinia Virus protein VP39 6 172 IPR029063 -
Glsi04g1898 246 Pfam O-methyltransferase domain 1 164 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1898 Glsi-ChrGlsi04 68401651 68404714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1898 1 173 Monolignol Biosynthesis Gene Families AT5G54160 61.143 1.50e-73 226