Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1897 ATGTGTACTAGTACTCAGTTGAGGCTAATAATGTTTGATGCCCTAACTCCAGGAGCTATAGTTCCAGCATCATCGGTTGCCAATATTTCTGCACATAACCGCCAGAATGATACTCGTGTCAACAAGAGTAGGAATAGAAGAATCCTCCATCTGCTTCCAGATTCTCATGCCAAATCTAGTCTCAACATAACTGAAGAACATGTATATTCTGGAGTTTTAAATGCTGCAGTTGAGCTCAACTTGTTTGAGATCATAGATAAGGCAAATGGAAAATTGATGTCAGCCTATGAGATTGCTTCTCAGCTTCCAACTCCATCACAGCACCAAGAATTGCCTTTCAGGCTTGATAGGATGCTGCGTTTGCTTGCTAGTCACAATCTTCTTGTTTGTTCCTATGGTACCAATGAAGATGGTGGGACTGAAAGACTCTATGGCCTCTCACCCGCTGGAAAATACTTGGTCAATGATGAAAGTGGTGGCCTATATATAATATCAACATTTCTGTGCCATCGAGCCCTTGTGGATACTTGGCTCAATTTTAAGGACGCAATTATAGACAAAGACAGTGACCTATTCATGGAATGCCCATGTACCAATACACAGAGATAG 609 0.4154 MCTSTQLRLIMFDALTPGAIVPASSVANISAHNRQNDTRVNKSRNRRILHLLPDSHAKSSLNITEEHVYSGVLNAAVELNLFEIIDKANGKLMSAYEIASQLPTPSQHQELPFRLDRMLRLLASHNLLVCSYGTNEDGGTERLYGLSPAGKYLVNDESGGLYIISTFLCHRALVDTWLNFKDAIIDKDSDLFMECPCTNTQR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1897 202 FunFam Caffeic acid 3-O-methyltransferase 40 153 - -
Glsi04g1897 202 PANTHER O-METHYLTRANSFERASE 63 183 IPR016461 GO:0008168
Glsi04g1897 202 Pfam Dimerisation domain 72 123 IPR012967 GO:0046983
Glsi04g1897 202 SUPERFAMILY "Winged helix" DNA-binding domain 62 157 IPR036390 -
Glsi04g1897 202 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 61 202 IPR016461 GO:0008168
Glsi04g1897 202 Gene3D - 66 189 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1897 Glsi-ChrGlsi04 68390624 68401618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1897 54 186 Monolignol Biosynthesis Gene Families AT5G54160 40.876 2.35e-22 91.3