Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1895 ATGTGGGGCTCTTGTTGGGTGGTTGGTGTGGCTTGGGGCATCAAACGAAGGGTTACTGAACAGAAAATGTCATTTCTATGTATATATAAACACTTCGCACCTCAACAAAAGCACTTCAAAACCCACTCTCCCCTTCCGCCACCACCTTCTTCAGAGAAAACAAGCCAAGACTTAAGCATGGGTTCTGCTGGTGAGACCCAAATAACTCCAACCCAAGTATCTGATGAAGAAGCAAACCTATTCGCCATGCAATTAGCCAGTGCCTCTGTACTTCTCATGATTCTCAAATCAGTTATAAAGCTGGATCTCTGGGAAATTATCGCCAAGGCTGGCCCTAGACATCTGAAGATCTCAAAAGGGACAGGATTGGCAATTTTAGAAAGCACTGGAAAAATGGTGAACCCATTATTGTTAAGCAACGATTTGATAGGTCATCAAGCTGGGATCCAATGGTCATATGGAGAGGGATTGGAGAGACAGCAGATGAAAAAAATGAAAGATGAAAACGGAGTGGTTAAGGCCATAGATTGCTTAGACTGGTCAGAGATAGATATTGAACTTGGTCAATTCATGAAAGGATACTATGATGGGCCTATCCATGAAAATGCTAAATTGCCTCATTACTCCTTGCAAAATGATGCAGGACCCAAGAGTTATATATCTTATGGGGTCAGTCAGGAACTTGGTACAGGTGACTCAGTGCCCAATCTCCACTTCAATTTGCGTGACATGGGCGTTGCAAAGCTGACTGAATTTCTGACAATGCATTGGAAAGAATTTGGGAAGTCAGACGATATAGTAAAGAAATTTGTTAAAAGGCCTCTTTATGATGGAGTTATTTTTCTTGACAGACACCATAAAAGAAAGTTGAAGGAAGAAATTGGTAAAGATAGTATTGGAAATCTAAGTAGTGATGTTGCCTTTACTGTTGAAATGATGTGA 942 0.4108 MWGSCWVVGVAWGIKRRVTEQKMSFLCIYKHFAPQQKHFKTHSPLPPPPSSEKTSQDLSMGSAGETQITPTQVSDEEANLFAMQLASASVLLMILKSVIKLDLWEIIAKAGPRHLKISKGTGLAILESTGKMVNPLLLSNDLIGHQAGIQWSYGEGLERQQMKKMKDENGVVKAIDCLDWSEIDIELGQFMKGYYDGPIHENAKLPHYSLQNDAGPKSYISYGVSQELGTGDSVPNLHFNLRDMGVAKLTEFLTMHWKEFGKSDDIVKKFVKRPLYDGVIFLDRHHKRKLKEEIGKDSIGNLSSDVAFTVEMM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1895 313 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 203 244 IPR045109 GO:0032454|GO:0033169
Glsi04g1895 313 Gene3D Cupin 245 300 - -
Glsi04g1895 313 MobiDBLite consensus disorder prediction 38 64 - -
Glsi04g1895 313 Gene3D - 60 124 IPR036388 -
Glsi04g1895 313 SUPERFAMILY "Winged helix" DNA-binding domain 75 116 IPR036390 -
Glsi04g1895 313 Gene3D Cupin 195 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1895 Glsi-ChrGlsi04 68371607 68376425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1895 60 111 Monolignol Biosynthesis Gene Families AT5G54160 71.154 2.49e-15 73.9