Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1874 ATGGCACTGACTGAAGAGGTGGAGGCTCTCACCAAAGCTTTCTCAGGGCATGGAATTGATGAGAAATTCTTGATATCAAAACTGGGAAAATGGGATCCGAAGGAGAGAACATTATTCAGGAGGGAAACACCAAATTTCTTCACAGGAGACGAACGCCAATTTGAGAAGTGGAATGATCATTGTATTCGACTTCTCAAGCATGAATTCATGCGTTTTAAGAATGCGGTGGTGCTTTGGGCCACGCATCCATGGGAAAGAGATGCTCGTTTAGCAAAGGAGGCCCTGACGAAGGGCCCACAGTCATACGGAGCGCTAGTTGAGATTGCATGTACCAGATCCTCGGAAGAGCTATTGGGAGTTAGAAAAGCCTACCATTCTCTCTTTGACAACTCCATTGAAGAAGACATTGCCTCTCACATCCATGACGTTGAACGCAAGCTCTTGGTTGCACTAGTCAGTGCCTACAGATATGAAGGATCAAAAGTTAAAGATGAAACTGCAAAATCAGAGGCCGAAGCACTTTCCATTGCCATTAAAAATGGCCAGAACAAGCCCATCGTTGAGGATGATGAAGTAATAAGGATACTAGCAACACGAAGCAAGCCTCATATCCGGGCAATTTACAAGCACTACAGAGAGATAAGTGGCAAGAACCTTGATGAGGATCTTGAGGACTTAAGGTTAAAAGAGACTGTGCAGTGCCTTTGTATCCCTCAAACATACTTCTGTAAGGTTTTGGACGCGGCATTGAGAATTGATGAGGATAAGAATACCAAGAAAGCACTTACTCGTGTAATTGTTACTCGAGCAGATACTGATATGAAGGAGATCAATAATGAGTATGCCAACCTATATGGAGTTTCTTTATCCCAGAAAATTGAAGAAATAGTTAAGGGGAACTACAAGGATTTCTTGCTAACCTTAATTGCAAGAGAAGGCTGA 942 0.4299 MALTEEVEALTKAFSGHGIDEKFLISKLGKWDPKERTLFRRETPNFFTGDERQFEKWNDHCIRLLKHEFMRFKNAVVLWATHPWERDARLAKEALTKGPQSYGALVEIACTRSSEELLGVRKAYHSLFDNSIEEDIASHIHDVERKLLVALVSAYRYEGSKVKDETAKSEAEALSIAIKNGQNKPIVEDDEVIRILATRSKPHIRAIYKHYREISGKNLDEDLEDLRLKETVQCLCIPQTYFCKVLDAALRIDEDKNTKKALTRVIVTRADTDMKEINNEYANLYGVSLSQKIEEIVKGNYKDFLLTLIAREG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1874 313 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Glsi04g1874 313 Gene3D Annexin 241 310 IPR037104 GO:0005509|GO:0005544
Glsi04g1874 313 PANTHER ANNEXIN 5 308 - -
Glsi04g1874 313 PRINTS Annexin family signature 15 37 IPR001464 GO:0005509|GO:0005544
Glsi04g1874 313 PRINTS Annexin family signature 280 295 IPR001464 GO:0005509|GO:0005544
Glsi04g1874 313 PRINTS Annexin family signature 252 272 IPR001464 GO:0005509|GO:0005544
Glsi04g1874 313 PRINTS Annexin family signature 177 203 IPR001464 GO:0005509|GO:0005544
Glsi04g1874 313 Gene3D Annexin 148 240 IPR037104 GO:0005509|GO:0005544
Glsi04g1874 313 ProSiteProfiles Annexin repeat profile. 165 251 IPR018502 GO:0005509|GO:0005544
Glsi04g1874 313 FunFam annexin D4 152 239 - -
Glsi04g1874 313 FunFam Annexin 82 151 - -
Glsi04g1874 313 SUPERFAMILY Annexin 4 310 IPR037104 GO:0005509|GO:0005544
Glsi04g1874 313 FunFam annexin D4 240 310 - -
Glsi04g1874 313 Pfam Annexin 259 308 IPR018502 GO:0005509|GO:0005544
Glsi04g1874 313 Pfam Annexin 171 224 IPR018502 GO:0005509|GO:0005544
Glsi04g1874 313 Pfam Annexin 87 151 IPR018502 GO:0005509|GO:0005544
Glsi04g1874 313 Gene3D Annexin 82 147 IPR037104 GO:0005509|GO:0005544
Glsi04g1874 313 SMART annex3 101 151 IPR018502 GO:0005509|GO:0005544
Glsi04g1874 313 SMART annex3 259 308 IPR018502 GO:0005509|GO:0005544
Glsi04g1874 313 SMART annex3 187 235 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1874 Glsi-ChrGlsi04 67957311 67960524 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1874 04 67957311 67960524 Glsi04g1874 04 67957311 67960524 ECH