Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1844 ATGGGTATGGCTGCAAAATCCCAGTTCCATGTTTTGGCTGTTGATGATAGTCTCATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCATCCTTTCATGTTACTGCCGTGGACTCTGGTAGCAAGGCTTTGAAATTTCTTGGTTTGAATGAAGATGAGCAGAGGAAATTTGATGCTGCCTTTGTTGCTCCAGAAACCCATCAGGATGTAGAAGTAAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTATGATCTCCTCAGAAAAATTAAGGAATCTAAATCTCTTAAAGACATCCCAGTAGTGATTATGTCCTCAGAGAATGTCCCATCAAGGATCAACAGGTGCTTAGAAGAAGGAGCTGAAGAATTTTTTCTGAAACCAGTGCAGCAGTCAGATGTAAACAAGCTCAAGCCCCATCTGATGAAATCAAGAGTTAAGGAAGATGAAGATCAACACATCAAGGAGGAAAGGAAGGGCACGGAAGAAAGCCATTCACCAGATAAAACCCGAGCAAAAATATAG 537 0.4153 MGMAAKSQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLNEDEQRKFDAAFVAPETHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLMKSRVKEDEDQHIKEERKGTEESHSPDKTRAKI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1844 178 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 160 IPR045279 GO:0009736
Glsi04g1844 178 CDD REC_typeA_ARR 11 141 - -
Glsi04g1844 178 MobiDBLite consensus disorder prediction 142 178 - -
Glsi04g1844 178 SMART REC_2 9 145 IPR001789 GO:0000160
Glsi04g1844 178 Gene3D - 10 177 - -
Glsi04g1844 178 SUPERFAMILY CheY-like 8 153 IPR011006 -
Glsi04g1844 178 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Glsi04g1844 178 MobiDBLite consensus disorder prediction 140 178 - -
Glsi04g1844 178 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1844 Glsi-ChrGlsi04 67393272 67394308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1844 1 163 Response Regulator Gene Family AT3G57040 69.512 1.02e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi04g1844 Response_reg 1.2e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1844 04 67393272 67394308 Glsi14g0541 14 6385336 6389944 CCT