Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1813 ATGCAGGACAAAGAAGCCAACCCACCTTTCCTCCCTAACCATAACACTACAAACACCACTACTGCCAAAGAAGATTCTCTTAGAAAACCCATCGGCGGTGGCAGTATAACTGCTGCCGGTGCCGGTGATAAGGTCAAGAGGGATGAATGGAGTGAAGGAGCAGTGTCAACCCTTCTTGATGCCTATGAAGCCAGATGGGTTCTCAGAAACAGAGCCAAACTCAAGGGCCAAGACTGGGAAGATATTGCTAAGAACGTTTCATCACGAGCAAATTCTACCAAATCCCCAAAAACCCAAACACAGTGCAAGAACAAGATAGAGTCTATGAAGAAAAGGTATCGTCTAGAGTCAGCTAGTTTTGCTCATGATGCCTCCTCATCTAATTGGCCTTTATATTCCCGCCTACATCTTCTGCTGCGTGGGACTGGGCCAGCGCCACTAGCAACAGCGGCGGCACCGCCTTCTCGACCACCGCACCGGACCATTAACCAGCCGATGGCGCGGGAGGAGCCCTCTTGGGCGTTGTCGTCACAACCTCCTCCTCTGGCTGCCACTCCACCACTTGCAAATGAACAGAACTCACATGGATCAAATGACAGGTTAGCCAAGGAAGATGGGTTTGGAACCAAGTCATGTGAGCATGAGACTCTGTTAATCAACACTGATAGCAGCACTAGCACACCTGTGATTTACAGTGAAAAGGCAGAGTTAAGATATTACAGAAAGAGGAGGAGTAAGAAGAAAATGGAGAAAACCAAGAGGAGAAGAAGGAAAGAAGAGATGGAGATAGGAGAGAGCATGAAATGGTTAGGACAAGTGGTGGTCAGGTCAGAGCAAGCAAGAATGGAGACGATGAAAGAGATAGAGAAGATGAGAGTGGAAGCTGAGGCCAAGAGAGGTGAAACGGATCTAAAGAGAACAGAGATAATTGCCAATACACAGTTAGAGATTGCTAGGATCTTTGCAAGTGTGAACAACGGTAGTGTTGATTCTTCATTGAGAATTGGAAGAACTTGA 1017 0.472 MQDKEANPPFLPNHNTTNTTTAKEDSLRKPIGGGSITAAGAGDKVKRDEWSEGAVSTLLDAYEARWVLRNRAKLKGQDWEDIAKNVSSRANSTKSPKTQTQCKNKIESMKKRYRLESASFAHDASSSNWPLYSRLHLLLRGTGPAPLATAAAPPSRPPHRTINQPMAREEPSWALSSQPPPLAATPPLANEQNSHGSNDRLAKEDGFGTKSCEHETLLINTDSSTSTPVIYSEKAELRYYRKRRSKKKMEKTKRRRRKEEMEIGESMKWLGQVVVRSEQARMETMKEIEKMRVEAEAKRGETDLKRTEIIANTQLEIARIFASVNNGSVDSSLRIGRT 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1813 338 Gene3D - 50 115 - -
Glsi04g1813 338 MobiDBLite consensus disorder prediction 1 47 - -
Glsi04g1813 338 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 24 324 IPR044823 -
Glsi04g1813 338 MobiDBLite consensus disorder prediction 9 25 - -
Glsi04g1813 338 Coils Coil 242 262 - -
Glsi04g1813 338 Pfam Myb/SANT-like DNA-binding domain 47 137 IPR044822 -
Glsi04g1813 338 MobiDBLite consensus disorder prediction 146 206 - -
Glsi04g1813 338 FunFam Trihelix transcription factor ASIL2 50 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1813 Glsi-ChrGlsi04 66428433 66431626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1813 32 202 Trihelix Transcription Factor Family AT3G14180 32.749 6.10e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi04g1813 Myb_DNA-bind_4 2.2e-18 CL0123