Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1795 ATGGCTACAGCCAGGACGGTCAAGGACGTTTCACCTCACGAGTTCGTGAAGGCCTACTCGGCTCACCTCAAGCGCTCCGGCAAGATAGAGCTTCCTGAGTGGACAGATATTGTGAAGACTGCAAGGTTTAAAGAACTGGCTCCTTATGATCCTGACTGGTACTATGTTAGAGCTGCCTCCATGGCAAGAAAGATCTACTTGAGAGGGGGTCTTGGTGTTGGTGCTTTTCAGAGGATTTATGGGGGCAGCCAGAGGAATGGTAGCCGTCCTCCTCATTTTTGTAAGAGCAGTGGTGCTATTGCTCGTCACATTCTTCAACAGTTGCAGAACATGAACATCATTGAGATTGACACCAAAGGTGGCAGGAGAATCACTTCCAGTGGTCAGCGGGATCTTGACCAGGTGGCTGGTCGGATTGTTGTTGCCCCTTGA 432 0.5023 MATARTVKDVSPHEFVKAYSAHLKRSGKIELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLQNMNIIEIDTKGGRRITSSGQRDLDQVAGRIVVAP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1795 143 Gene3D - 1 142 IPR036388 -
Glsi04g1795 143 FunFam 40S ribosomal protein S19 2 143 - -
Glsi04g1795 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Glsi04g1795 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Glsi04g1795 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Glsi04g1795 143 PANTHER 40S RIBOSOMAL PROTEIN S19 2 139 IPR001266 GO:0003735|GO:0005840|GO:0006412
Glsi04g1795 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1795 Glsi-ChrGlsi04 65917352 65919245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1795 1 143 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 86.014 4.38e-95 269