Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1781 ATGCGAAGGTTTGCTTGGTTCGGAAGTAATCTGTTGATTTCTTGTAGGAAAAGGGGTAGGATGCAGCATAAGCTTGATAATTTTAATAAATCCTTGGCTCTACTTGAAGTTCTGGAGTCTTTTGCAATGGTTGCTGCAGAAAATCCTGTAAATGAGAAAGAGGATAATCTTCCAGCAGAAGCAAAAGATATTTTAAAATCATTGGCCAGTGAATGGGATGATGTACTTGATGCAAATGCATTCCAAGTGATCCCTCTTAAAGGGGCAATGACGAATGAGGTATTCCAAATAGAATGGCCAACAAAGACAAAGGAAACCTCACGAAAAGTGGTAGTTAGAATTTATGGTGAAGGCGTGGACATTTTTTTTGGCAAGGATGACAAGGTCCGGACATTTGAATTCATGTCTAAGCATGGGCAGGGGCCTCGTCTGCTAGGACAATTTCCAAATGGCCATATTGAAGAGTTCATCCATGCACGGACGTTATCAGCATCTGATCTTTGTGATTCAAGTATATATACTCTTATAGCGGCCAAAATGAAAGAGTTCCATGATCTTGACATGCCTGGTCCAAAGAAAGCTCACTTGTGGGATAAATTACGGAATTGGTTAAGTGAGGCTAGGCGGTTGTCTTGCCCTAAAGAGGCTGAAGCCTTTTATTTGGACACAATTGAGAAGGAAATCTCCATTTTGGAAAAGGAGCTATCAGGTGCTCACCAACGCATAGGGTTTTGCCACAATAATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATAATTGATTACAAATATGCAAGTTATAATCCTGTAGCTTATGACATTGCAAACCACTTTTGTGAGATGGCTGCCAACTATCATACAGAAACACCTCATATTCTTGACTTTAGTAAATATCCTGATTTGGAGGAGCGTGAAAGATTTGTACGTGCATATTTGAGTTCTTTAGGTGAACAACCTAGTGACGTTGAAGTAGACCAGCTACTTAATGAAGTTGAGAAGTTTACACTTCCAAATCATCTATTCTGGGGCTTGTGGGGAATAATTTCGAGACACGTCAACAAAATCGACTTTGACTACCAGGAGTATGCAAAACAGAGGTTTCAAGAGTACTGGTCTAGGAAACCTTTTGTTTTGGGCTCTGTAGGACCTTCCCCTGAAAGTTTGATTGACGATAACAGTACGTGCATAACTGTTGATTTTGATGTTCTACAACCAAACTATGCTACTTTCATTCATGCCTCTGACATGGGAGAGACTGGGGTTCTTAGATTTTAG 1293 0.3998 MRRFAWFGSNLLISCRKRGRMQHKLDNFNKSLALLEVLESFAMVAAENPVNEKEDNLPAEAKDILKSLASEWDDVLDANAFQVIPLKGAMTNEVFQIEWPTKTKETSRKVVVRIYGEGVDIFFGKDDKVRTFEFMSKHGQGPRLLGQFPNGHIEEFIHARTLSASDLCDSSIYTLIAAKMKEFHDLDMPGPKKAHLWDKLRNWLSEARRLSCPKEAEAFYLDTIEKEISILEKELSGAHQRIGFCHNNLQYGNIMLDEETNSVTIIDYKYASYNPVAYDIANHFCEMAANYHTETPHILDFSKYPDLEERERFVRAYLSSLGEQPSDVEVDQLLNEVEKFTLPNHLFWGLWGIISRHVNKIDFDYQEYAKQRFQEYWSRKPFVLGSVGPSPESLIDDNSTCITVDFDVLQPNYATFIHASDMGETGVLRF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1781 430 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Glsi04g1781 430 Gene3D Phosphorylase Kinase; domain 1 68 156 - -
Glsi04g1781 430 Gene3D - 116 377 - -
Glsi04g1781 430 SUPERFAMILY Protein kinase-like (PK-like) 59 381 IPR011009 -
Glsi04g1781 430 Pfam Choline/ethanolamine kinase 107 308 - -
Glsi04g1781 430 CDD ETNK_euk 81 379 - -
Glsi04g1781 430 PANTHER CHOLINE/ETHANOALAMINE KINASE 47 385 - -
Glsi04g1781 430 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1781 Glsi-ChrGlsi04 65496552 65502245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1781 41 386 Acyl Lipid Metabolism Gene Families AT1G74320 64.740 1.43e-174 490
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0290 14 3696260 3700864 Glsi04g1781 04 65496552 65502245 CCT
Glsi04g1781 04 65496552 65502245 Glsi04g1781 04 65496552 65502245 ECH