Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1778 ATGCGTGAACATTGGAGAGCTTCACCGATTGCAAATTACGTTGATTTTGTTTTCTTGCTGGAAAACGTGAGAATCTGCAATTCCATATGCCTATTGGCGAGAAGAGGAAAGCCCCGTCTTTGCTTTGTAATAGGCTTCAACCCTTCTTCTTCCTTTTCTTCTACTTCTAAGCTGATTGATATCATGGTTCAAGAGAGGAAGCTCGTGGATGAAGTGTCCGGCTGGCTCAGAGTTTACGATGACGGCTCAGTAGACCGGTCATGGACTGGTCCGCAAGCATTCAAGTTCATGGCCGAACCGGTGCCTCCCCATGAAGAATTTGTGGACGGTGTTGCCACCCGTGACGTCGTCATCAACGAAAAGTCCGGCAACCGTGTGCGGCTGTACCTTCCGGAGGACAACCCTGACAATGAAGACAAACTCCCCATACTCCTCCACTTTCACGGTGGCGGGTTTTGCATAAGCGAAGCCGACTGGTTCATGTACTACCAAATTTACATCCGATTTGCCCGGTTGGCCCGCGTCATCTGCGTCTCCCCTTATCTCCGGCGTGCCCCAGAGCACCGCCTCCCTGCCGCCACAGACGATGGCTTCTCAACCCTTCATTGGCTTCAATTAGTCGCTAAAGGCGACTCCCACGAGCCGTGGCTTGAAAAATATGCCGACTTCAACCGAGTTTTCCTCATCGGAGATAGCTCCGGCGGGAACCTGGTTCATGAGGTAGCTGCAAGAGCTGGAACGGTAGACCTGAACCCATTGAGGATAGCCGGAGGGATCCCGATTCACCCAGGTTTTCTCCGATCAGAGAGAAGCAAATCAGAACTAGAGAAACCCCAGTCACCATTTCTAACCCTGGACATGCTGGATAAGTTCTTGAGCATGGCACTACCAATTGGAAGCAACAAGGACCACCCCATAACATGTCCGATGGGCTCTGGTGCACCGTCGCTAGACAGCCTCAGACTACCGCCCTTTCTTCTGTGCTTGGCGGAGATGGACTTGATATTTGACACAGAGATGGAGTATTACGAAGCCATGAAGAAGGCTAACAAAGATGTGGAGCTTTTCATTAGCCCAGGAGTGACTCACAGTTTCTATCTGAACAAAGTTGCTGTGGACAAGGACCCCAATACTGGCAAACAAACCCATGCTCTTATTGCAAAGGTCAAAGAGTTCATCCATAAGCATTGA 1191 0.5038 MREHWRASPIANYVDFVFLLENVRICNSICLLARRGKPRLCFVIGFNPSSSFSSTSKLIDIMVQERKLVDEVSGWLRVYDDGSVDRSWTGPQAFKFMAEPVPPHEEFVDGVATRDVVINEKSGNRVRLYLPEDNPDNEDKLPILLHFHGGGFCISEADWFMYYQIYIRFARLARVICVSPYLRRAPEHRLPAATDDGFSTLHWLQLVAKGDSHEPWLEKYADFNRVFLIGDSSGGNLVHEVAARAGTVDLNPLRIAGGIPIHPGFLRSERSKSELEKPQSPFLTLDMLDKFLSMALPIGSNKDHPITCPMGSGAPSLDSLRLPPFLLCLAEMDLIFDTEMEYYEAMKKANKDVELFISPGVTHSFYLNKVAVDKDPNTGKQTHALIAKVKEFIHKH 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1778 396 Pfam alpha/beta hydrolase fold 144 366 IPR013094 GO:0016787
Glsi04g1778 396 SUPERFAMILY alpha/beta-Hydrolases 61 395 IPR029058 -
Glsi04g1778 396 Gene3D alpha/beta hydrolase 44 394 IPR029058 -
Glsi04g1778 396 PANTHER ARYLACETAMIDE DEACETYLASE 69 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1778 Glsi-ChrGlsi04 65399407 65401970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1778 68 396 Carbohydrate Esterase AT1G68620 35.736 3.09e-56 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0284 14 3664497 3666822 Glsi04g1778 04 65399407 65401970 CCT
Glsi04g1778 04 65399407 65401970 Glsi04g1778 04 65399407 65401970 ECH