Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1776 ATGGCGTTTGAGAAGCTAGGATGCTGTGGAAGGTTCCTTGAGAGTTCAAAACCCTACTTTGCAATGATCTCTTTGCAGTTTGGTTATGCAGGGATGAACATTATCACTAAGGTTTCCCTCAACCAAGGCATGAGCCATTATGTCCTTGTGGTCTATCGCCATGCTATTGCAACTGCTGTTATAGCTCCATTTGCCTTTATTTTTGAAAGGAAAGCTCAACCAAAGATAACATTCCCAATTTTCATGCAAATTTTCATCCTTGCTCTCCTTGGGCCTGTAATTGATCAAAATTTCTACTATGCTGGGTTGAAATTCACATCTCCAACCTTCTCTTGTGCAATGAGCAACATGCTACCTGCCATGACTTTTGTGATGGCAGTTTTATGCCGGATGGAGAAAATCAACATGAAGAAGGTGAGGTGTCAAGCAAAGGTAGTGGGAACCTTAGCGACAGTGGCTGGGGCCATGCTGATGACATTGTACAAAGGCCCTATTGTTGAGATGGTGTGGACCGAACATCATTCTCACAACACAACCCATGAAACAAACACCACAAGATCCTCAGACAAAGAATGGTTCATAGGCTCCATCTTCCTTATCATTGCCACTCTTGCCTGGGCTTCCCTTTTTGTTTTACAAGCCAAAGCCTTAGAAACATACAAGAATCATCAGCTAACCCTTACATCATTAGTGTGCTTCATAGGCACTCTTCAGGCGATTGCTGTTACTTTTGTTATGGAGCACAACCCTTCTGTGTGGAAAATTGGCTGGGATATGAACTTACTTGCAGCTGCCTATGCTGGGATTGTCACATCAAGCATATCATACTATGTACAAGGATTGGTGATTAAAAAGAAAGGACCTGTCTTTGCTACTGCCTTTAGCCCTCTGATGATGATTGTTGTCGCCATCATGGGCTCCTTCATCCTTGTAGAAAAGATTTATCTTGGAGGTGTGATTGGTTCCATCTTAATAGTGATAGGTTTATACTCTGTTCTGTGGGGAAAGCACAAAGAAAGCGTGCAGAGCAAAGTGGCCGAGGATATACCTTTGCCGATGAAGGGTTCTCAAGTTGATGGAAATGCAGATGCCACTGAATTTACTGAAGACAAATCAGAGAAAGCAGAAGCCAATATCAAAACCACTTCAGTTGTCATTAGCATGCCTATCAATGAACCTTCCATAATCAAACCGATCCAAGAGGCAAAAGCTTAA 1215 0.4255 MAFEKLGCCGRFLESSKPYFAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAIATAVIAPFAFIFERKAQPKITFPIFMQIFILALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTLATVAGAMLMTLYKGPIVEMVWTEHHSHNTTHETNTTRSSDKEWFIGSIFLIIATLAWASLFVLQAKALETYKNHQLTLTSLVCFIGTLQAIAVTFVMEHNPSVWKIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIVVAIMGSFILVEKIYLGGVIGSILIVIGLYSVLWGKHKESVQSKVAEDIPLPMKGSQVDGNADATEFTEDKSEKAEANIKTTSVVISMPINEPSIIKPIQEAKA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1776 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Glsi04g1776 404 PANTHER WAT1-RELATED PROTEIN 17 344 IPR030184 GO:0016020|GO:0022857
Glsi04g1776 404 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Glsi04g1776 404 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Glsi04g1776 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1776 Glsi-ChrGlsi04 65274388 65276910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1776 1 401 Nodulin-like Gene Family AT5G07050 68.704 0.0 564