Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1753 ATGATGGGAACAAAACTCACTGTGAGATCATCAACCATCCTGGGATTGCTGATCAGTTTCATAGCCCTCACCCAAACAAGCACTGCTCAAGCACCAAACTATGTGGGTGATGACTGCCATAACTCAACCCAACAACCTCTCTCTGGTTCATACGAAACCAACCTTAACATGGTCCTCTCATGGCTATCCACTGATGCAGCCACAAGCAAAGGTTACAACCACACCAGCATAGGCGGCAATGGATCCGGCAACGCTGTGTATGGCCTCTACGATTGCCGAGGGGACGATGCAGGATACTTCTGTCAATTCTGTGTCTCAACTGCCAGCAGAGAAGTTCTCCAACGTTGTCCAAACCGATTATCTGCTGTCATATGGTATGATTTCTGCATCCTTCGCTACTCCGACAAGAATTTCTTTGGAAATGTGACAATAAACCCATCATGGCATGCTTTCGGGTCCAAAAACATCTCGGATCCAACCGAGCCTAAGAAGGCCGAGGATTATATGAGGAGTTTGATAAGAAAAGCAACCCAGGAGACTAACCAGTTGTTTGCCATGGGTGGGTTCGATTTGAGTCCAGGGAAAAGAAGGTATGGGTTGGTGCAGTGCAGTCGAGACCTTACTAATGAGGGGTGCAGGCAGTGCTTGGAGGCTATGGTGGATAAAGTTCCTCAGTGTTGTGAGAAGAAGCAGGGATGGCAGGTTTTGGCTCCAAGTTGTTTGATAAAGTACGATGATTTTATGTTCTACCAGCTTAATAATCATCAAACATCGTCGTCTTCTACAAGTCCAGCCAAGAATGATGTTAGCAAGTCAAAAGTCTTGATAACCAGCGTAAGTGTAATAGTGGCAACAATTATACTAAGTTGCTTTGCCTACTACTACTGGAGAAGGAAGAAAAGGTTAAGTGGAGATGAAATGTTATCAGAGACCACTCCTATATCTTTTCATGACTTTTATCAAAGGGAGAGTTTATTGAACACAGACCTTCCTACAATCCCCTTAATCACAATTCAACAGAGTACTCATCACTTTTCAGAAGAATCTAAATTGGGAGAAGGTGGATTTGGTCCTGTTTACAAGGGAACTTTGCCAGATGGGAGGGAAATTGCCGTCAAAAGGCTCTCAAAAACTTCTGGTCAAGGTTCAGAGGAGTTTAAGAATGAAGTAATATTCATAGCCAAATTGCAGCATAGAAACCTTGTTAGGCTCTTGGGTTGCTGCATTGAGGAAAATGAAAAGCTACTTCTCTATGAGTACATGCCAAATTCTAGCCTTGACTTTCATCTTTTTAATGAGACAAGAAGAAAGCAACTAGATTGGAAACTAAGACTCAACATTATTAATGGAATTGCACGAGGAATTCTATACCTTCACGAAGACTCTCGCCTTAGAGTAATCCATAGAGATCTAAAAGCCAGCAATGTCCTTTTGGACCATGAGATGAATCCTAAAATATCAGATTTTGGATTGGCAAGGACATTTGAAGGAGGCCAAAACCAAGGAAATACAAGAAGAGTAATGGGTACTTATGGATATATGTCTCCGGAGTATGCTATGGAAGGATTATTTTCAGTAAAATCTGATGTATTCAGCTTTGGAGTTCTTCTGTTAGAAATTATCTCAGGGAAAAGGAATAGTGATTTCTATCTTTCAGAACATGGTCAAAGTCTTCTTATTTATACTTGGAAACTGTGGTGTGATGGCAAATGTTTGGAATTGATGGATCCAACATTGGAAAAGTCATACACAGCCGATGAAGTTTTGAAGTGCATACACATTGGTTTGCTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCGACTGTGGTTGTCATGCTGGCCAGTGAATCAATGAAACTTCCCGAACCTAATCACCCTGCATTTTCAGTTGGACGAATGGCCCTAGGTGAATCATCTACATCAAAAAATTCCAAGGATCCTTCTATTAATGATGTAACAGTGACTCATATTACTCCAAGGTAA 1992 0.4172 MMGTKLTVRSSTILGLLISFIALTQTSTAQAPNYVGDDCHNSTQQPLSGSYETNLNMVLSWLSTDAATSKGYNHTSIGGNGSGNAVYGLYDCRGDDAGYFCQFCVSTASREVLQRCPNRLSAVIWYDFCILRYSDKNFFGNVTINPSWHAFGSKNISDPTEPKKAEDYMRSLIRKATQETNQLFAMGGFDLSPGKRRYGLVQCSRDLTNEGCRQCLEAMVDKVPQCCEKKQGWQVLAPSCLIKYDDFMFYQLNNHQTSSSSTSPAKNDVSKSKVLITSVSVIVATIILSCFAYYYWRRKKRLSGDEMLSETTPISFHDFYQRESLLNTDLPTIPLITIQQSTHHFSEESKLGEGGFGPVYKGTLPDGREIAVKRLSKTSGQGSEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLLYEYMPNSSLDFHLFNETRRKQLDWKLRLNIINGIARGILYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARTFEGGQNQGNTRRVMGTYGYMSPEYAMEGLFSVKSDVFSFGVLLLEIISGKRNSDFYLSEHGQSLLIYTWKLWCDGKCLELMDPTLEKSYTADEVLKCIHIGLLCVQEDAADRPTMSTVVVMLASESMKLPEPNHPAFSVGRMALGESSTSKNSKDPSINDVTVTHITPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1753 663 SUPERFAMILY Protein kinase-like (PK-like) 331 634 IPR011009 -
Glsi04g1753 663 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Glsi04g1753 663 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Glsi04g1753 663 Gene3D Transferase(Phosphotransferase) domain 1 421 627 - -
Glsi04g1753 663 CDD STKc_IRAK 351 616 - -
Glsi04g1753 663 MobiDBLite consensus disorder prediction 639 663 - -
Glsi04g1753 663 FunFam Cysteine-rich receptor-like protein kinase 28 35 137 - -
Glsi04g1753 663 Gene3D - 147 249 IPR038408 -
Glsi04g1753 663 Gene3D - 33 138 IPR038408 -
Glsi04g1753 663 FunFam Cysteine-rich receptor-like protein kinase 10 147 249 - -
Glsi04g1753 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Glsi04g1753 663 Gene3D Phosphorylase Kinase; domain 1 311 420 - -
Glsi04g1753 663 SMART serkin_6 345 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1753 663 FunFam Liguleless narrow1 421 624 - -
Glsi04g1753 663 Pfam Protein tyrosine and serine/threonine kinase 348 615 IPR001245 GO:0004672|GO:0006468
Glsi04g1753 663 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 420 - -
Glsi04g1753 663 ProSiteProfiles Protein kinase domain profile. 345 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1753 663 Pfam Domain of unknown function (DUF3403) 618 663 IPR021820 GO:0004674
Glsi04g1753 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 661 - -
Glsi04g1753 663 Pfam Salt stress response/antifungal 164 245 IPR002902 -
Glsi04g1753 663 Pfam Salt stress response/antifungal 39 135 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1753 Glsi-ChrGlsi04 64171817 64178086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1753 14 663 Receptor kinase-like Gene Family AT4G05200 41.716 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi04g1753 PK_Tyr_Ser-Thr 1.8e-47 CL0016