Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1749 ATGTCTGAAGAACCCGAGAGGATTGTGGTGATCCAGCTTGCGTCAAGAGATGCTAACACAATGGCAATAAAATGGGCTCTGCAGGGCTTGTCACTTGGAACTAGAGATGAGATTACACTTCTTGCAATTCTTCGCCATGTTCGCAGCTCTCCCATGTTTACCTTCATTGCTCCTGGGAAACTGCACCAGAAAATTGTCGAGAAAGAAGTTGCGAAGAGGAAGGAAGAGTACCATAACAATGCAGAGATCATGAAAATCACTGAGCAGTGTGAAACAGATAAGATTGAATTCCGCATAGAAGTTCTCGCAGGCCCTTTTCCAGAAGTTGCTGTAAATGCTGCCACCAGTTTGAGGGCAACATTGGTGATACTTGATAGAAAAATGAAGAAATACAAGAAACATTTCATGGAGAGGCTCTCTTGTGGTATCTTATTGATGAAACGTGATAACTCCATTGAGCACTTCAGAGGACAAATGGAAATAGAGCATTCTGGAAAAGGCAAAGCATTTTGTGTTAAATGTTCTGGATCCTCATTAGCCATACAGTTCACAGGAAATTCATTTTCCTGCCCTTGGAATTCCACTACCTCGAGGTCTAGCGCTACCACGGCTAAGAATGCTCAACTTCAATCTCAAGGCAGACAAAATTCTGCAAATAGAGAACTAGATATGGCAAGAGGGTTTTGTCTATTATCCTCTCCTGATACTCAAGAGACATGTCATACAGAAATGTTAGTTGAACAAGAGAATCATAGCCACAACCTTGGAGCAAATCAAATAGTTGAACAATTTAAAAATTCTATATGCTCTCTCTGCGATAACAGAAGACCGAATTTTGGATCGAAAAGGGACTTCACATATGCAGAGCTCCAAACAGCCACACAGGGATTTTCCCAGAAGAACTTTCTTTCAGAAGGTGGGTTTGGTGCTGTCTACAGAGGGAAGCTGCATGGACTAAAGATTGCAGTTAAGCAACATAGATGTGCAAGTCTCCAAGGGGAGAAGGAATTCAAGTCTGAAGTTAACTTGCTCAGCAAAGCAAGACATGAGAATGTGGTTATGCTGCTGGGATCATGCTCAGAAGGAAATGAAAGGCTTCTTGTTTATGAATATGTAGGAGAGACTAACTATGGCTACAATGATGCAGCACATTCTCGTAAACCTCTTAGTTGGCCAGACAGGATCAAAGTAGCTTTGGGAGCAGGCAAAGGTTTGCTGTACTTGCATGAGAACAATACCATACACAGGGATATGAGACCAAATAACATCCTTGTCACACATGATTATGAAACACTGCTGGGAGATTTTGGTCTGGCAAGACCTTATTATGGAGACTCAGTATACTCAACAGATATTGCTGGAACTATCGGGTATTTGGCACCAGAATATGCAGAATCTGGTAAAGCGTCAACCAAGACAGATGTGTATTCTTTTGGGGTGGTTCTTCTTCAGCTAATTACTGGAATGAGGATCACAGACAAAAGACTTCGAGATAAAAGTCTTGTTGGATGGGCTAGACCACTATTGAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGAATGATGGATAGCCACGATTGCCATCAGCTCTTTTGGATGATTCGTCTAGCAGAAAAGTGTCTCAGCAGGGATCCTCGCAAGAGACTGGTTATGGATACAGTGGTAAATGCCTTAACTCACATAGCTGAAGGCAGCACATGCAGTGTTGTACTGAGAGACTGTTCCCCCTCAAGGTCAGATTCATCCTATGAGGACATGCCAGACTCTCCTAAATTAGAAGGCAGCATGCAGGGTTCTTCTGGATCACCAGGTGATGGCGAGGATGGAAGCTTCTATGAAGGATCTACTCCAACTAGTAGCAACATGCGTCATACGAGTTTAAGACTCCCACCATCTCCTCCATTAGGGAGCACTTATTCAAGTGTATCAAGCTTAAGCATGTAA 1947 0.4258 MSEEPERIVVIQLASRDANTMAIKWALQGLSLGTRDEITLLAILRHVRSSPMFTFIAPGKLHQKIVEKEVAKRKEEYHNNAEIMKITEQCETDKIEFRIEVLAGPFPEVAVNAATSLRATLVILDRKMKKYKKHFMERLSCGILLMKRDNSIEHFRGQMEIEHSGKGKAFCVKCSGSSLAIQFTGNSFSCPWNSTTSRSSATTAKNAQLQSQGRQNSANRELDMARGFCLLSSPDTQETCHTEMLVEQENHSHNLGANQIVEQFKNSICSLCDNRRPNFGSKRDFTYAELQTATQGFSQKNFLSEGGFGAVYRGKLHGLKIAVKQHRCASLQGEKEFKSEVNLLSKARHENVVMLLGSCSEGNERLLVYEYVGETNYGYNDAAHSRKPLSWPDRIKVALGAGKGLLYLHENNTIHRDMRPNNILVTHDYETLLGDFGLARPYYGDSVYSTDIAGTIGYLAPEYAESGKASTKTDVYSFGVVLLQLITGMRITDKRLRDKSLVGWARPLLKERNYPDLIDERMMDSHDCHQLFWMIRLAEKCLSRDPRKRLVMDTVVNALTHIAEGSTCSVVLRDCSPSRSDSSYEDMPDSPKLEGSMQGSSGSPGDGEDGSFYEGSTPTSSNMRHTSLRLPPSPPLGSTYSSVSSLSM 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1749 648 PANTHER OS01G0253100 PROTEIN 211 563 - -
Glsi04g1749 648 FunFam Proline-rich receptor-like protein kinase PERK8 259 371 - -
Glsi04g1749 648 Gene3D Phosphorylase Kinase; domain 1 270 371 - -
Glsi04g1749 648 SUPERFAMILY Protein kinase-like (PK-like) 282 577 IPR011009 -
Glsi04g1749 648 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 376 574 - -
Glsi04g1749 648 MobiDBLite consensus disorder prediction 613 648 - -
Glsi04g1749 648 MobiDBLite consensus disorder prediction 578 648 - -
Glsi04g1749 648 ProSiteProfiles Protein kinase domain profile. 297 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1749 648 Gene3D Transferase(Phosphotransferase) domain 1 379 574 - -
Glsi04g1749 648 Pfam Protein kinase domain 299 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1749 Glsi-ChrGlsi04 64052288 64065352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1749 285 573 Trihelix Transcription Factor Family AT5G38560 43.046 9.35e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Glsi04g1749 Pkinase 2.5e-40 CL0016