Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1732 ATGACTTGCCCTCCATTTAACTGGAATGGAATATTAGAGCCCTGCGCCCGACCAAGCGAAACTAGAACCCCACTGGAAAACCCGAAGGAGAGTCATAGTGATAAGCTTGTCCAAACAATTGTCCTTGTGGGTGTTGTTGTAGATGCTGTGCTGGGAACTTCTGCTGCTAGTGACAACTCAGGAGAGGGGAATGCTGATCAATCTCTTTCCGCTTCGGTGAAAGACGTTTGTGATGTGACCTTATACAAGGATTGGTGCTACAGCAGCCTTGGCCCTCTAGTTCAGTCAGGCCAGGTTCATCCTGAGGATCTGTTCAAGTTGTCAATCAAAGTGGCCTTAACTGAAGTGTCTAAAGCTGCTCAATATCTCTCTGAACAGGCAGTTGATTATCTGAACGTCTCATTGTCTTCTGGGGAAAAATCTTCCTTGCTTCAAGTTTTCCAGGATCTTCAGACATGGTTGGGTGCTGTAGGTACAATTCAGACCTAA 489 0.4622 MTCPPFNWNGILEPCARPSETRTPLENPKESHSDKLVQTIVLVGVVVDAVLGTSAASDNSGEGNADQSLSASVKDVCDVTLYKDWCYSSLGPLVQSGQVHPEDLFKLSIKVALTEVSKAAQYLSEQAVDYLNVSLSSGEKSSLLQVFQDLQTWLGAVGTIQT 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1732 162 Pfam Plant invertase/pectin methylesterase inhibitor 72 157 IPR006501 GO:0004857
Glsi04g1732 162 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 127 IPR035513 -
Glsi04g1732 162 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 161 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1732 Glsi-ChrGlsi04 62640217 62640938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1732 37 161 Carbohydrate Esterase AT3G10710 32.886 7.19e-20 83.6