Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1731 ATGTCAGCTTCAGCCTCATCCTTGCCCTTCTTTTCTTCCCTACTCTTCCTCTTCTTCCTCTTTGCACCATTACTCCTCGCTCAAGCTCCATCTCCATCCCCATCTCCAGCTCAACCTTCACCACCTTCAAACTCGCCTCCTCCTCCTAATTCTTCCTCTGCAGCCTGCAAGTCCACATTATACCCGAAATTATGCCGTTCCATTCTCTCAGCCATTCGTTCGTCGCCATCTGATCCATATAGACTTGGGAAATTCTCAATCAAGCAAAGCCTCAAACAGGCTAAGAAACTCGCCAAAGTGTTTGACGACTTCCTCAAAAAGCATAGTTCTTCTTCTTCTCTTAACCATGCGGAGATTGCTGCACTAGATGACTGTAGGGAGCTCAACCAGCTCAATGTTGATTACTTGGAATCTGTCTCGTCGGAGTTGAAATCCGCCGAGTCCTCAAGCCAAGAAATGGTGGAAGGGATCCAAACCTATCTCAGTGGCGTAGCCACCAATCACTACACCTGCTATGATGGGTTGGTGGTGAGCAAAAGCGGCATTGCCAATGCCCTAGCAGTGCCTCTCAATAATGTGACGGTGCTGTACAGTATTTCACTTGGGTTGGTCACTGAGGCTCTGAACCGAAATCTCAAGAAGCATAAGACTCGTAAACACGGTCTTCCTACCAAGTCTTACAAGGTCAGGCAGCCACTTGAGAAGCTCCTCAAGCTTCTTAGGGGAAAGTATGGTTGTAAGAAATCATCCTATTGCACTAGAAGTGAAAGGATTCTTAAAGAAAGCGAAGAGAAAGGGATTTTATTGAATGACTTTGTGATTGTGAGCCCTTATGGTACAGACAACTTCACTTCCATTGGAGATGCCATTGCTGTTGCACCCAACGACACAAAACCACAAGATGGCTATTTCCTTATCTATGCTAAAGAAGGATATTATGAGGAGTATATTACAGTCCCCAAATATAAGAAGAATATTTTGCTCATTGGAGATGGTATCAACCACACTGTCATAACAGGGAACCATAGTGTTGTGGATGGTTGGACAACTTTCAATTCTTCCACTTTTGCTGTAACTGGAGATAGATTCACAGCAGTAGATGTTACGTTCAGAAACACAGCAGGCCCACAAAAGCACCAAGCAGTAGCTGTGAGGAACAACGCTGACCTCTCCACATTCTACCGCTGCAGTTTTGAAGGATACCAAGACACTCTCTATGTGCACTCTCTGAGGCAATTCTACAGAGAATGTGACATCTACGGCACCGTTGATTTCATCTTCGGCAATGCCGCCGTGGTCTTCCAGAACTGCAACATCTACGCCAGAAAACCACTGCCTAACCAGAAAAACGCAATCACAGCACAAGGTAGAACAGACCCAAACCAAAACACTGGCATCTCCATCCAAAACTGCACCGTTTCAGCTGCTCCAGACTTGGCTGCAGACATGAACTCCACCTTGAACTACTTGGGTCGGCCATGGAAGGAGTATTCAAGGACTGTCTTTATGCAGTCCTTTATTGGAGACCTGATTCAACCTCGTGGGTGGTTAGAGTGGAATGGCACAGTTGGTTTAGACACCCTCTTTTATGGTGAATTCAACAACTATGGACCTGGTGCTACTACTAGTAAGAGGGTGAAATGGGGTGGTTACAATCTGATGAATGCTGAACAAGCATTCAACTTTACAGTCCTAAAGTTTACACTGGGAGAAACATGGCTTCCTGACACAGATATACCTTTCAGTAAAGGATTGCTAGATTAG 1764 0.4541 MSASASSLPFFSSLLFLFFLFAPLLLAQAPSPSPSPAQPSPPSNSPPPPNSSSAACKSTLYPKLCRSILSAIRSSPSDPYRLGKFSIKQSLKQAKKLAKVFDDFLKKHSSSSSLNHAEIAALDDCRELNQLNVDYLESVSSELKSAESSSQEMVEGIQTYLSGVATNHYTCYDGLVVSKSGIANALAVPLNNVTVLYSISLGLVTEALNRNLKKHKTRKHGLPTKSYKVRQPLEKLLKLLRGKYGCKKSSYCTRSERILKESEEKGILLNDFVIVSPYGTDNFTSIGDAIAVAPNDTKPQDGYFLIYAKEGYYEEYITVPKYKKNILLIGDGINHTVITGNHSVVDGWTTFNSSTFAVTGDRFTAVDVTFRNTAGPQKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNIYARKPLPNQKNAITAQGRTDPNQNTGISIQNCTVSAAPDLAADMNSTLNYLGRPWKEYSRTVFMQSFIGDLIQPRGWLEWNGTVGLDTLFYGEFNNYGPGATTSKRVKWGGYNLMNAEQAFNFTVLKFTLGETWLPDTDIPFSKGLLD 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1731 587 Gene3D - 271 587 IPR012334 -
Glsi04g1731 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 205 IPR035513 -
Glsi04g1731 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 207 IPR035513 -
Glsi04g1731 587 Pfam Plant invertase/pectin methylesterase inhibitor 53 202 IPR006501 GO:0004857
Glsi04g1731 587 SUPERFAMILY Pectin lyase-like 271 584 IPR011050 -
Glsi04g1731 587 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Glsi04g1731 587 NCBIfam pectinesterase inhibitor domain 35 205 IPR006501 GO:0004857
Glsi04g1731 587 MobiDBLite consensus disorder prediction 31 55 - -
Glsi04g1731 587 Pfam Pectinesterase 273 570 IPR000070 GO:0030599|GO:0042545
Glsi04g1731 587 MobiDBLite consensus disorder prediction 31 49 - -
Glsi04g1731 587 FunFam Pectinesterase 268 585 - -
Glsi04g1731 587 CDD PMEI-like_3 56 206 - -
Glsi04g1731 587 SMART PMEI_2 47 203 IPR006501 GO:0004857
Glsi04g1731 587 PANTHER PECTINESTERASE 22 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1731 Glsi-ChrGlsi04 62451510 62455253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1731 7 586 Carbohydrate Esterase AT3G10720 59.935 0.0 742