Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1729 ATGGACAATGATGGTGATTATCGATCGGCAGTATCAGATATAATGCCAAGCGATCAACAGAGGAGGAAGCAGTCTTTCATTCGGAAAATTTTCACAACAACGGAGAGAAATGGAAGGGCAACAGGAGGAGCTTTGGTTGATTCCCTTGAAGCACTGTCTGACTCATCCATTGAAAATCAATACTTTAGCGCCTCAGAACCTCCATTGTCTTCTGGTGAGGAAATGCAGAATTTAAGAGTCTTTGTAGCGACATGGAATGTAGGTGGGCAATGTCCTAATGGGAACCTTAACCTGAATGATTTTCTTCAGGTCAGAAATGAACCAGATATATATGTTTTGGGCTTTCAAGAAATTGTCCCTTTAAATGCGGGAAATGTGCTGGTATTAGAGGATAATGAGCCTGCTGCAAAATGGCTTGCTTTGATCAATCAGTCACTCAATGGACCTTCTGATTTAGCTTCAAAGGGACTAAAACCCACAGCATCATTTGGTGGGTCATTTTTCTTCCAAAAGCCAACTTATAAGAAGATTAAGAAGACTTTCAGGACATTAAATGGAAAGAGGCTAAAAAGTTGTAACTGTATTCCTGAAATGGAAAGGAAGGCTACCAAGGAATTTTGTTTTCTCTGCCAAGAATCAAATGTAAACTTGGATGATTCTTCCTCTGAAGAGGATGATGAAAGTTCCCAAACTTCCCTTTCTTTGGCAACTAATCATATGAAATACAGTCTTGTTGCAAGCAAGCAAATGGTGGGAATTTTTGTTAGTGTGTGGATGAGGAAGGAGCTTGTTCAGTATGTTGGCCATTTGAGAATATGTTGCACTAGTCGTGGGATCATGGGCTGCCTTGGAAACAAGGGTTGTATATCTGTTAGCTTGTCATTGTATCAGACAAGTTTTTGCTTTATCTGTAGTCATTTGGCATCCGGAGAGAAAGAGGGTGATGAGCTTCGGAGAAATCTTGATGTTATAGAGATACTAAAGAACACTCAGTTTCCAAGGATTTGCAAGACATCATATAGTAGGATGCCTGACAAAATTTTAGACCACGATAAGATCATATGGTTTGGGGACTTAAATTACCGAATTGCTTTGAGCTATGATGATGCAAAAAGGCTCGTGGAAAAGAGGGATTGGCCTGCACTTTTTGACAAGGATCAGCTTCAGATGGAAAGGGAAGCAGGTCGTGTATTTAAGGGTTGGAAAGAGGGGAAGATCTATTTTGCACCTACTTATAAATATCCCCTCAACTCAGATACTTACTATGCTGAAGGTGTGAAAATTTCAAAGAACAAAAGGAGAACTCCAGCTTGGTGTGATAGAATTCTATGGCGTGGAAGGGGAATTCAGCAACTTTCTTACGTACGTAAGGAATTGAAGTTCTCTGACCATCGGCCTGTTTGTGCAACTTTTTTGGTAGAAGTTGAGGTTACGTTTAGGGGACACAAGAAAAAAGTTTCTACTTTCAATTTTCGGATTACAGATCTTGTACCCACAAGAAGTGCATATTACTCTTGA 1518 0.4005 MDNDGDYRSAVSDIMPSDQQRRKQSFIRKIFTTTERNGRATGGALVDSLEALSDSSIENQYFSASEPPLSSGEEMQNLRVFVATWNVGGQCPNGNLNLNDFLQVRNEPDIYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINQSLNGPSDLASKGLKPTASFGGSFFFQKPTYKKIKKTFRTLNGKRLKSCNCIPEMERKATKEFCFLCQESNVNLDDSSSEEDDESSQTSLSLATNHMKYSLVASKQMVGIFVSVWMRKELVQYVGHLRICCTSRGIMGCLGNKGCISVSLSLYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTSYSRMPDKILDHDKIIWFGDLNYRIALSYDDAKRLVEKRDWPALFDKDQLQMEREAGRVFKGWKEGKIYFAPTYKYPLNSDTYYAEGVKISKNKRRTPAWCDRILWRGRGIQQLSYVRKELKFSDHRPVCATFLVEVEVTFRGHKKKVSTFNFRITDLVPTRSAYYS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1729 505 SMART i5p_5 76 479 IPR000300 GO:0016791|GO:0046856
Glsi04g1729 505 SUPERFAMILY DNase I-like 67 478 IPR036691 -
Glsi04g1729 505 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 57 488 IPR045849 GO:0004445
Glsi04g1729 505 Gene3D Endonuclease/exonuclease/phosphatase 68 495 IPR036691 -
Glsi04g1729 505 Pfam Endonuclease/Exonuclease/phosphatase family 83 464 IPR005135 GO:0003824
Glsi04g1729 505 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1729 Glsi-ChrGlsi04 61806020 61812274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1729 242 485 Acyl Lipid Metabolism Gene Families AT2G43900 29.329 3.14e-32 129