Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1719 ATGGCAGAGGTCATGAACATGCCTCCTGATTCTCTCGAAAAATCCCCCTCCGCTTCTGCTTCAGCTGCTCCGCCCCAGGAGCTTCCGGCGGCGGCAGTGGCGTCAGCTGAGGACGATCCTCTAGCTCCGCCACCATCATCCTCCCTTCCACCAGCCCCACATTCTTCGTCTCGGAGAAGGGATAGGGATTCGAGGGATAGGAGGGATGATAGGGATTTTGACCGCCACCCTAATCGCCGTGGGAGTGATTACTACGACAGAAACATCTCGCCACCACCACCTCCTCCTAGAGACAGAGATAGGGACTTCAAGCGCCGCCGCAGCCCTAGCCCTTCCTATCGTGACCGACGTTACTCTCCTCCACGGCGCTCACCTCCACCTTATAAGCGATCGAGGAGGGGGAGTCCCCGTGGCGGTTATGCATCCGATGACAGATTTGGCTATGATTATTTTGGTGGCTATGAACTAGGAGTGGGTGGAAGGCCTGGTTATGCAGATGAGAAGTCTTATGGAAGGTTTGCACATCGCGTAGGGGCATATCAAAATGGGATTTCTGTCCTAGAATCAAATCGTGGTTATGCTGACTTGCCAAGCAGTGGTACACAAAGAGAGGGGTTGATGTCCTATAAGCAGTTTATTCAGGAGCTTGAGGATGATATATTACCAGCTGAAGCTGAGCGCAGATATCAAGAGTACAAATTGGAGTACATTTCTACCCAGAAACGGGCTTACTTTAATGCTCATAAGGATGAGGAGTGGTTGAGAGATAAATATCATCCAACAAATTTACTTACAGTCATTGATAGGAGGAATGACAATGCGAGGCGGCTGGCAAAGGATTTTTTGCTTGATTTGCAGAGTGGAACACTAGACATAAATCCTAGTTTAAATGCCTCTTCATCCAGCAAACCAGGGCAGGCAAGTGAGCCAAATTCTGAGGAGGAAGGAGACAATGGTGGTAAACGGAGAAGGCATGGTAGGGGGCCTAATAAAGAAAATGATTTCTCAGCTTCTCAAAAGGCTCACTTGATCAGTTCTGAACCTAGACGAATACAAGCAGATATTGAACAGGCTCAGGCCCTTGTACGCAAGCTTGACATGGAAAAGGGGATTGAAGATAATATTTTATGCAGCAGTGATCACAGTAAAAATGATGATAAATCTCATAGTGGATCTTTGGGCCCCATAATAATTATACGAGGCTTAACATCTGTTAAGGGGTTAGAGGGTGTTGAGCTTCTGGACACGCTTCTTACATATCTTTGGCGGATTCATGGTGTTGATTATTATGGCCTGATTGAGACTAATGAGCCTAAGGGTTTTAGGCATGTGAGACCAGAAGTAACAGTGCATGATGAAACAAGTAAATCAGGGTCTGAATGGGAAAAAAAACTCGATTTATTCTGGCAAGGAAGGTTGAGTGGTCAGGATCCCTTGGAAATAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGACGTGTTAGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGGGCTAAGGGCTGCACAAAGCTTTTTCATGCGGCTGAGTTTGTACACAAACATCTGAAGCTTAAACATCCAGAAGTTGTGATGGAAGTAACTCTGAAAGTGCGTGAGGATCTCTATTTTCAAAACTACATGAATGATCCAGATGCTCCTGGGGGAACACCTATCATGCAGCAACCGCAGAAGGAAAAACCTCTAAAGCGTAGATTAGGTCTCGAAGGACGCTTGAGAGATGATCGTGGCAATCGGCGAGACCATGAACGGAGTGACAGAGTGAATGATGGAGATAGGCCTGAGAATTCCCCATCCCATGAGCGGCAGTCCAAGGCACTTGAGATGGGAAATCATGATGAAACAATGTATGATGCATATGCAGGACCTGCTGTTCCTCCATTTACCTCTGATATACCCCCTCCTCCAGTGCTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAGCAAGGAGGAGCATCTTCATACGATGCCTCTGGAAGGAAGATGCGGTCTGGCCCTCACATAGGTGGAGCATCGCCAATAATTGCTGTTCCCCCAGCTTTTAGACCTGATCCTCGGCGGATGCGAAGTTATCAAGATCTGGATGCCCCAGAGGATGAAGTCAGTGTGATAGACTATCGGAGTTTGTAG 2229 0.4733 MAEVMNMPPDSLEKSPSASASAAPPQELPAAAVASAEDDPLAPPPSSSLPPAPHSSSRRRDRDSRDRRDDRDFDRHPNRRGSDYYDRNISPPPPPPRDRDRDFKRRRSPSPSYRDRRYSPPRRSPPPYKRSRRGSPRGGYASDDRFGYDYFGGYELGVGGRPGYADEKSYGRFAHRVGAYQNGISVLESNRGYADLPSSGTQREGLMSYKQFIQELEDDILPAEAERRYQEYKLEYISTQKRAYFNAHKDEEWLRDKYHPTNLLTVIDRRNDNARRLAKDFLLDLQSGTLDINPSLNASSSSKPGQASEPNSEEEGDNGGKRRRHGRGPNKENDFSASQKAHLISSEPRRIQADIEQAQALVRKLDMEKGIEDNILCSSDHSKNDDKSHSGSLGPIIIIRGLTSVKGLEGVELLDTLLTYLWRIHGVDYYGLIETNEPKGFRHVRPEVTVHDETSKSGSEWEKKLDLFWQGRLSGQDPLEIMTAKEKIDAAAVDVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEVVMEVTLKVREDLYFQNYMNDPDAPGGTPIMQQPQKEKPLKRRLGLEGRLRDDRGNRRDHERSDRVNDGDRPENSPSHERQSKALEMGNHDETMYDAYAGPAVPPFTSDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGASSYDASGRKMRSGPHIGGASPIIAVPPAFRPDPRRMRSYQDLDAPEDEVSVIDYRSL 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1719 742 ProSitePatterns Zinc finger C2H2 type domain signature. 514 537 IPR013087 -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 292 349 - -
Glsi04g1719 742 Pfam SERRATE/Ars2, N-terminal domain 210 292 IPR021933 -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 686 727 - -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 292 313 - -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 557 622 - -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 314 331 - -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 1 144 - -
Glsi04g1719 742 Pfam Arsenite-resistance protein 2 448 608 IPR007042 -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 575 622 - -
Glsi04g1719 742 PANTHER ARSENITE-RESISTANCE PROTEIN 2 339 738 IPR039727 GO:0006397
Glsi04g1719 742 MobiDBLite consensus disorder prediction 93 122 - -
Glsi04g1719 742 MobiDBLite consensus disorder prediction 55 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1719 Glsi-ChrGlsi04 61234371 61251841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1719 77 742 C2H2 Transcription Factor Family AT2G27100 61.404 0.0 746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1719 04 61234371 61251841 Glsi04g1719 04 61234371 61251841 ECH