Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1712 ATGCCAATTTGTTATTTTCTTAATTGCAAAATGTTGGAACTTCCATTCAATGTCCCATTTCGGTTCTTTAAATTGGATATCAAGCACTTACCCTATTTTGAGCACTTGCGGGCTGAACTGCTAGGTGTTGCAGTTGCTTTTGTTGCCATGGCCCTTTCTACTGCTTATATCTACCACTACAAGAAACTCAAACCCAAAGGTTGCTTAGATCCAAACAATTTCAAAGAATTCAAGCTTGAGAAGAAGACACAAATCAGCCCCAATGTTGCAAGATTTAGATTTGCACTTCCAACGCCTACTTCAGTACTGGGTCTTCCGGTTGGGAAATACATACGTGCCAGGGGAAAAGACAACCAAGGAGAGGAAGTTACAAGACCATATACCCCCATCACTTTGGATTCAGATATTGGGTACTTTGAATTGGTTGTTAAGATGTACCCAAAGGGAAGACTGTCCCACCATTTTAGAGAGATGAAGGAAGGTGATTACTTGCCTGTAAAGGGGCCCAAGGGGCGTTTTAGTTACAAACCTGGTCAAGCTCGGGCATATGGAATGGTTGCTGGAGGGTCAGGCATTACCCCAATGTTTCAGTGCGACAAAATAAGTGCACTTATATCTGATTTGCAGCTCATCAGAGCCATTCTAGAAAATCCCAAGGACACTACAAAATTGTACCTTATATATGCCAATGTGACAGTGGATGACATTCTTCTAAAGGAAGAACTAGATGGGTTTTCAAACAAGTTTCCTGACCGTTTCAAAGCTTATTATGTTTTAAATCAGCCGCCTAATTCTTGGAGTGGTGAGGTCGGGTTTGTATCGAAGGAAATGATTCAAACCTATTGTCCTGCACCTGCCCCAGATATTCAGATACTTAGGTGTGGTCCACCAGGCATGAATGAGGCCATGGCTGCTCACCTTGACGCACTTGGCTATACAAAAAACATGCAGTTCGAGTTCTGA 963 0.4247 MPICYFLNCKMLELPFNVPFRFFKLDIKHLPYFEHLRAELLGVAVAFVAMALSTAYIYHYKKLKPKGCLDPNNFKEFKLEKKTQISPNVARFRFALPTPTSVLGLPVGKYIRARGKDNQGEEVTRPYTPITLDSDIGYFELVVKMYPKGRLSHHFREMKEGDYLPVKGPKGRFSYKPGQARAYGMVAGGSGITPMFQCDKISALISDLQLIRAILENPKDTTKLYLIYANVTVDDILLKEELDGFSNKFPDRFKAYYVLNQPPNSWSGEVGFVSKEMIQTYCPAPAPDIQILRCGPPGMNEAMAAHLDALGYTKNMQFEF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1712 320 PANTHER NADH-CYTOCHROME B5 REDUCTASE 64 320 IPR001834 GO:0016491
Glsi04g1712 320 Pfam Oxidoreductase FAD-binding domain 77 175 IPR008333 -
Glsi04g1712 320 Pfam Oxidoreductase NAD-binding domain 185 303 IPR001433 GO:0016491
Glsi04g1712 320 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 72 176 IPR017927 GO:0016491
Glsi04g1712 320 Gene3D Translation factors 67 167 - -
Glsi04g1712 320 CDD cyt_b5_reduct_like 77 320 - -
Glsi04g1712 320 SUPERFAMILY Riboflavin synthase domain-like 67 177 IPR017938 -
Glsi04g1712 320 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 165 315 IPR039261 -
Glsi04g1712 320 Gene3D - 168 320 IPR039261 -
Glsi04g1712 320 FunFam NADH-cytochrome b5 reductase 166 320 - -
Glsi04g1712 320 PRINTS Cytochrome B5 reductase signature 234 245 - -
Glsi04g1712 320 PRINTS Cytochrome B5 reductase signature 125 132 - -
Glsi04g1712 320 PRINTS Cytochrome B5 reductase signature 161 175 - -
Glsi04g1712 320 PRINTS Cytochrome B5 reductase signature 103 114 - -
Glsi04g1712 320 PRINTS Cytochrome B5 reductase signature 184 203 - -
Glsi04g1712 320 PRINTS Cytochrome B5 reductase signature 290 298 - -
Glsi04g1712 320 FunFam NADH-cytochrome b5 reductase 67 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1712 Glsi-ChrGlsi04 60929619 60936826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1712 64 320 NADPH P450 reductases AT5G17770 68.872 9.78e-132 374