Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1707 ATGGACTCTGACAAACCAGTTGATAATTCTTCAAATTTTGAATCTAACCTTAGTTCATCATCACTTAGAAGCGTTAAGTCCATTCACTCTGGGGGCTCTAGCAGAAATTCGATCCAGGAAGTGACTTTCAGTCATTCGGAGTCAAAAACTGTTCGGCCTGGGTCGAAGGGATCAGATTCTGAAGCGCTCAGCACGTCCAAGAAGGAAATAAGCGAAGAGGATGCGAGATTAGTTTATATAAATGACCCTGTGAAGACAAATGAGAAGTTTGAATTTTCGGGAAATTCGATTCGCACTACGAAATACTCCATTCTCACCTTTTTGCCCAAGAATTTATTTGAACAATTCCATAGAATTGCTTACGTTTATTTTCTTTTAATTGCCATACTTAATCAACTTCCTCAGATTGCCGTTTTTGGCGTGGGTATTTCTTTTTTGCCGTTAGCCTTTGTCCTGCTAGTTTCAGCTGTGAAGGATGCATATGAGGACTGGAGGCGGCATCAGTCAGACAAAGTTGAGAACAACAGGTTAGCATCAGTTTTGTTTGATGATAATTTCCAACAGAAAAAATGGAAGGAAATCAGAGTAGGTGAAGTCATTAAAATCCATGCAAATGAAACTATTCCTTGTGATATGGTATTGCTGTCTACCAGTGATCCAACTGGAGTTGCATATGTTCAAACTATTAATTTAGATGGAGAGTCGAATTTGAAGACTCGGTATGCAAAATCAGAGACCTTTTCAAAGTTTCCTGAAAAGGAGATAGTTAATGGGTTAATCAAGTGTGAGAAACCCAATAGGAACATATATGGGTTTCAGGCTAGCATGGAAATTGATGGCAAGAGATTGTCACTTGGATCCTCAAATATTATTCTTCGAGGCTGTGAAATCAAGAATACCAATTGGGCCCTTGGTGTTGCTGTTTATTGTGGCCGTGAAACCAAAGCTATGCTAAACAGCTCAGGAGCTCCATCAAAGAGGAGCCGGCTGGAGACTCGCATGAACATTGAGATCATCACGATCTCTTTCTTTCTTGTAGCTTTGTGTACAGTTATCTCTGTATGTGCTGCTATTTGGTTAAAGCGCTTCAAAGATGAATTGGATCTCATGCCCTATTATCGGAAAATGGACATTTCGAAGGGAAAAAAAGAAAGTTATAAATATTATGGATGGGGATTGGAAATATTGATCACATTCCTCATGTCAGTTATAGTGTTCCAAGTCATGATTCCCATATCATTGTATATTTCCATGGAGCTAGTCCGGATTGGTCAGGCCTGCTTCATGATCAGAGACACAAGAATATATGATGAGGCATCAAATTCAAGATTTCAGTGCAGAGCTTTAAATATAAATGAAGATTTAGGGCAAATTAAATATGTTTTCTCAGACAAAACTGGTACACTTACTGAGAACAAGATGGAATTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTAAAAAGGAAATTCTAGAGAATGAGCAAGTTGAATACTCTGTTCGAGTTGATGGAAAGGTCCTGAGGCCAAAGATGAAGGTAAAAGTTGTTCCAGAACTTTTGCGATTATCAAGATGTGGATTCAAAAATAAGGAGGGAAAACAGATTCGTGATTTCTTCCTTGTGTTGGCAGCTTGCAACACTATTGTGCCTCTTCTTGTTGAGACATCTGATCCTACAGTCAAGTTGATAGATTACCAAGGGGAGTCACCAGATGAACAAGCATTGGCATATGGTGCTGCTGCCTACGGTTTTATGCTTGTAGAACGAACCTCAGGCTACATAATTATTGATATTCAGGGAGAAAGACAGAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGACCGGAAGAGGATGTCTGTTATATTGGGGTACCCCGACAATTCTGTGAAAGTTTTTGTCAAAGGTGCGGATACATCCATGTTTAGTGTGATAGATAGATCATTGAACATGGATATAATACATGCAACCGATACCCATCTTCACTCTTATTCCTCCATGGGTTTGAGGACACTTGTTATTGGCATGCGGGAATTAAATGTGTCAGAATTTGAGCAATGGCACTCTGCCTTTGACGCGGCAAGCAATGCTTTGACTGGTAGGGCTACTTTGCTTCGCAAGGTTTCTAGCAGTGTAGAAAACAATCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAACTGCAGCAAGGGGTGCCAGAATCCATTGAGTCTCTAAGGACAGCAGGTATCAAGGTATGGGTGTTGACTGGGGATAAACAGGAAACTGCCATATCAATTGGCTACTCCTCAAAGCTTCTAACAAGCAAAATGACTCAGATTGTAATTAATAGCAACAATAGAGGGTCATGTCAGAGGAGTTTACAAGATGCCCTTGTAATGTCTAACAAATTCATGACCATATCTGGGGCAAGTAACAGTACAGGAGGGAGTATTGATGCTGTAACAAATCCAATAGCCTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGACAGTGAACTCGAAGAAAAGCTCTTTCAACTAGCAAGTACATGTTCTGTGGTTCTCTGCTGTCGAGTGGCTCCACTGCAAAAGGCTGGGATTGTTGCCCTTGTGAAGAACAGGACATCTGACATGACGCTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATAAGTGGACAGGAGGGTCGACAAGCTGTAATGGCATCAGATTTTGCGATGGGACAGTTTAGGTTTATAGTTCCTCTCTTATTGGTACATGGCCATTGGAATTATCAACGGCTGGGTTACATGGTACTATACAATTTTTACAGAAATGCTATCATTGTTCTTGTCCTATTTTGGTATGATCTGTTCACTGCCTTCACTTTGACAACTGCTATAACTGAATGGAGCAGTCTGTTGTATACAGTAGTTTACACTTCAATTCCAACAATTATTGTTGGTATTCTTGACAAGGATCTAACTAAAAGGACTCTCCTAACATATCCTCAGCTTTATGGGGCTGGGCAGAGACAAGAGGCCTACAACAAAAATTTATTTTGGTTGACAATGGCTGATACTTTGTGGCAAAGCATGACAGTGTTCTTTATTCCTCTCTTTTCATATTGGGGAAGCACTGTCGATATATCAAGTATAGGGGATCTTTGGACTCTTTCCGTGGTCATTTTGGTTAATTTACACTTAGCCATGGACGTCATCAGGTGGACTTGGATTACTCATGCAGCCATTTGGGGTTCTATTGTTGCAACTTTCATTTCTGTGATGATCATTGATGCTATACCTTCATTTCCTGGTTATTGGGCCATCTTTCATGCTGCAGGCACTGAGTTGTTCTGGTTATGTTTGCTTGGAATCATCATAGCAGCGTTGCTTCCTCGTTTTGTTATAAAATTTCTCTGTCAATATTACTGTCCTGATGATATTCAAATTTCAAGAGAAGCTGAAAAGCTTGCGAATACAAGAGTGGTTCGAGGCGGGCACATAGAAATGCCTCCTATCACAGATGGTTCGCCTAAATGA 3549 0.4038 MDSDKPVDNSSNFESNLSSSSLRSVKSIHSGGSSRNSIQEVTFSHSESKTVRPGSKGSDSEALSTSKKEISEEDARLVYINDPVKTNEKFEFSGNSIRTTKYSILTFLPKNLFEQFHRIAYVYFLLIAILNQLPQIAVFGVGISFLPLAFVLLVSAVKDAYEDWRRHQSDKVENNRLASVLFDDNFQQKKWKEIRVGEVIKIHANETIPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKSETFSKFPEKEIVNGLIKCEKPNRNIYGFQASMEIDGKRLSLGSSNIILRGCEIKNTNWALGVAVYCGRETKAMLNSSGAPSKRSRLETRMNIEIITISFFLVALCTVISVCAAIWLKRFKDELDLMPYYRKMDISKGKKESYKYYGWGLEILITFLMSVIVFQVMIPISLYISMELVRIGQACFMIRDTRIYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSKKEILENEQVEYSVRVDGKVLRPKMKVKVVPELLRLSRCGFKNKEGKQIRDFFLVLAACNTIVPLLVETSDPTVKLIDYQGESPDEQALAYGAAAYGFMLVERTSGYIIIDIQGERQRFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMFSVIDRSLNMDIIHATDTHLHSYSSMGLRTLVIGMRELNVSEFEQWHSAFDAASNALTGRATLLRKVSSSVENNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQIVINSNNRGSCQRSLQDALVMSNKFMTISGASNSTGGSIDAVTNPIALIIDGTSLVYILDSELEEKLFQLASTCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFIVPLLLVHGHWNYQRLGYMVLYNFYRNAIIVLVLFWYDLFTAFTLTTAITEWSSLLYTVVYTSIPTIIVGILDKDLTKRTLLTYPQLYGAGQRQEAYNKNLFWLTMADTLWQSMTVFFIPLFSYWGSTVDISSIGDLWTLSVVILVNLHLAMDVIRWTWITHAAIWGSIVATFISVMIIDAIPSFPGYWAIFHAAGTELFWLCLLGIIIAALLPRFVIKFLCQYYCPDDIQISREAEKLANTRVVRGGHIEMPPITDGSPK 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1707 1182 FunFam Phospholipid-transporting ATPase 566 699 - -
Glsi04g1707 1182 Pfam Phospholipid-translocating ATPase N-terminal 78 140 IPR032631 -
Glsi04g1707 1182 SUPERFAMILY HAD-like 449 921 IPR036412 -
Glsi04g1707 1182 SFLD p-type atpase 446 932 IPR044492 -
Glsi04g1707 1182 Gene3D - 149 319 - -
Glsi04g1707 1182 NCBIfam HAD-IC family P-type ATPase 851 967 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi04g1707 1182 Gene3D - 718 921 IPR023214 -
Glsi04g1707 1182 MobiDBLite consensus disorder prediction 1 68 - -
Glsi04g1707 1182 PRINTS Sodium/potassium-transporting ATPase signature 455 476 - -
Glsi04g1707 1182 PRINTS Sodium/potassium-transporting ATPase signature 958 978 - -
Glsi04g1707 1182 Pfam Cation transport ATPase (P-type) 571 645 - -
Glsi04g1707 1182 NCBIfam phospholipid-translocating P-type ATPase 92 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi04g1707 1182 Gene3D - 558 703 IPR023299 GO:0000166
Glsi04g1707 1182 SFLD C1.7: P-type atpase like 446 932 - -
Glsi04g1707 1182 FunFam Phospholipid-transporting ATPase 150 319 - -
Glsi04g1707 1182 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1148 IPR032630 -
Glsi04g1707 1182 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 468 734 IPR023299 GO:0000166
Glsi04g1707 1182 MobiDBLite consensus disorder prediction 8 61 - -
Glsi04g1707 1182 ProSitePatterns E1-E2 ATPases phosphorylation site. 464 470 IPR018303 -
Glsi04g1707 1182 CDD P-type_ATPase_APLT_Dnf-like 94 1041 - -
Glsi04g1707 1182 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Glsi04g1707 1182 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Glsi04g1707 1182 SUPERFAMILY Calcium ATPase, transduction domain A 175 316 IPR008250 -
Glsi04g1707 1182 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 67 1159 - -
Glsi04g1707 1182 SUPERFAMILY Calcium ATPase, transmembrane domain M 92 1148 IPR023298 -
Glsi04g1707 1182 FunFam Phospholipid-transporting ATPase 718 921 - -
Glsi04g1707 1182 Pfam E1-E2 ATPase 178 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1707 Glsi-ChrGlsi04 60725004 60730690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1707 1 1178 Primary Pumps ATPases AT5G04930 68.957 0.0 1699