Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1703 ATGGCTAAACCAGTTTTTTCCCATTCACATCTCTTTGTCTTAATCTTGTTTCTTGCTATCCATCATTCAAAGCAGTTACAACTATCTCAGTCTCAGAACCTGGTGAAATTCCAGGAGCTTCTTGGATACCCATCAGCACTAAGCAGCTTCAGCAGCACCACTGATTTTTGCAACATTGAACCCACCCCGTATTTGACGATTGTCTGCTATGAGGAAAACATAACGCAGCTGCATGTGGTTGGCAACAATGGGTTTACCCCTTTGCCTCAAAACTTCTCCACAGGCTCTCTATTTGCCACTCTAGGTGGGCTATCAAGCTTAAAAGTCCTCTCTTTGGTTTCTTTGGGTCTCTGGGGCCCTATACCAGAAAGCGTTGCTCAAATGCCTTCTCTAGAAATACTTAACATTAGCTCAAATCACTTCAGTGGAGCTATCCCAGCTCAACTTTCGTTTCTGAGGAATCTGCAATCAGTGGTGCTTGATGATAACGACTTCGCCGGGCAAATTCCCTCATGGATTGGCTCACTTCAAGGTTTGGCTGTGCTGAGTATGAAGAACAATTTTCTTAGTGGGTCTCTGCCAACTTCGGTAAATGCTCTGCAAACTCTGCGGATACTGGATCTATCAAATAATCAGTTACATGGAGAATTACCTGATCTTTGCAAGTTGACAAATCTTCAAGTTCTTCATTTGGAAAACAACACATTTGGACCTCATTTTCCTTCTCTGCCCACCAAGTTAATTTCCCTTGTGCTTAGAAATAACAGTTTCCGGTTTGGTATACCTTCTAATTTAAGTTCTTACTATCAGCTTCAAAAGCTAGACCTTTCCTTGAACGAATTTGTGGGACCATTTCTGCCATCTTTACTGTCACTGCCTTCCATCAAATACCTAGATATTTCGGCAAATGAATTTACTGGGATGCTATTCAGTAATTTGTCCTGCAATTATGATATCCTTTTTGTCAATCTATCTTCAAATCTGTTAAAAGGGGAACTTCCCAGTTGTTTAAAACCAAAGAGCAGGGTTGTATTGTATGCTGGAAATTGTTTATCAACAGAGGATCAAGATCAGCACCCGCCCAACTTCTGCCAGAATGAGGCTCTGGCTGTGGAAATCATACCCCATGAACAAAAGCATAAAAGAACTACTGGTAAAGCAGTTATTGTGTCAAGCATGGGAGGTATTGTTGGAGGAGTCCTGATTTTTGGAGTGGTTTTCTTGTTCATCAGCCGGGCACATAAAAAAGGTGCTGTGAAAGTGCCAACAGGGTCCACTCTGGAGCATGTTATCAGCCAGCTGCATAACAAACCTGAAGTGAAAACACCTACAAGGTCCATAGTGGAGAATATCATCAGCCGACTGCCTAACAAGCATTCTGTGAAAACACTAACACGATCAATAATGGAGCATGTCATCAGCCGGGTACACCACAAACATGTTATGAGAACACCTACAAGGTCCATAGTAGAGCATGTCTCATCAGTAAACACAGCAAAACTACTTACAGATGCAAGGTATATTTCACAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGAGGAACTTAAGGAGGCTACAAATAATTTTGATGTATCATGTTTCATAAGTGAAGGCTCACGTGGTCAGATCTATAAAGGGGTGCTCTCTGATGGAACTCATATTGCTATTAGAAGTTTAAAAATGAAGAAAAGACATGGCCCTCAGACCTATATGCACCATATTGAGTTGATTTCAAAACTTAGGCATTCACACTTGATCAGTGCTCTTGGACATTGCTGTGAGTGCAACCAGGATGATCCAAGTGTCAGCAGTATATTTCTCATATTTGAGTTTGCACCACACAGAAGTTTAAGAGGCTGCATATCTGGATCTTCTGGAGACAAGCTTTCTTGGGCGCAGAGAATAGCAGCCGCAATTGGAGTAGTTAAAGGCATTCAATTTTTGCACACAGGGATAGTGCCTGGACTATATTCAAATAATCTGAAGATAACAGATATTCTAATGGATAATAATCTTAACGTTAAAATAAGCAGCTATAATCTTCCTCTGTTGGCTGAAAATAAGACGATGGTGGGCACTGGAACTTTTTCCCCTGGAGTAAAAGGAAATGTTCAAGCAAGGATAAAGGATGAAGATAAGAATGATGTTTACGATATTGGGGTAATCTTATTAGAAATCATTCTAGGACGAACAATCATGTTCCATAATGAAGTTGGAACATTAAAAGATCTGTTACAGGCAAGCTTAACAACTGATGATATGGCTAGAAGGAGTATTGTTGATCCGGCAGTTCACAAAGAGTGCTCAGATGAATCATTAAAGACAGTGATGGAGTTATGTGTGAGGTGCCTCTCTCAAGATCCAACTGATAGGCCTTCTGTGGAAGGTGTTCTCTGGAATTTGCAGTATGCAGCACAGGTCCAGAATTCATGGAGAAGAGACTCCAACGACACTAGAGATTTTCTATAA 2490 0.4108 MAKPVFSHSHLFVLILFLAIHHSKQLQLSQSQNLVKFQELLGYPSALSSFSSTTDFCNIEPTPYLTIVCYEENITQLHVVGNNGFTPLPQNFSTGSLFATLGGLSSLKVLSLVSLGLWGPIPESVAQMPSLEILNISSNHFSGAIPAQLSFLRNLQSVVLDDNDFAGQIPSWIGSLQGLAVLSMKNNFLSGSLPTSVNALQTLRILDLSNNQLHGELPDLCKLTNLQVLHLENNTFGPHFPSLPTKLISLVLRNNSFRFGIPSNLSSYYQLQKLDLSLNEFVGPFLPSLLSLPSIKYLDISANEFTGMLFSNLSCNYDILFVNLSSNLLKGELPSCLKPKSRVVLYAGNCLSTEDQDQHPPNFCQNEALAVEIIPHEQKHKRTTGKAVIVSSMGGIVGGVLIFGVVFLFISRAHKKGAVKVPTGSTLEHVISQLHNKPEVKTPTRSIVENIISRLPNKHSVKTLTRSIMEHVISRVHHKHVMRTPTRSIVEHVSSVNTAKLLTDARYISQTMKMGASLPAYRTFALEELKEATNNFDVSCFISEGSRGQIYKGVLSDGTHIAIRSLKMKKRHGPQTYMHHIELISKLRHSHLISALGHCCECNQDDPSVSSIFLIFEFAPHRSLRGCISGSSGDKLSWAQRIAAAIGVVKGIQFLHTGIVPGLYSNNLKITDILMDNNLNVKISSYNLPLLAENKTMVGTGTFSPGVKGNVQARIKDEDKNDVYDIGVILLEIILGRTIMFHNEVGTLKDLLQASLTTDDMARRSIVDPAVHKECSDESLKTVMELCVRCLSQDPTDRPSVEGVLWNLQYAAQVQNSWRRDSNDTRDFL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1703 829 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 64 817 - -
Glsi04g1703 829 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 510 618 - -
Glsi04g1703 829 Gene3D Ribonuclease Inhibitor 29 150 IPR032675 -
Glsi04g1703 829 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Glsi04g1703 829 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 619 824 - -
Glsi04g1703 829 ProSiteProfiles Protein kinase domain profile. 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1703 829 Gene3D Ribonuclease Inhibitor 242 370 IPR032675 -
Glsi04g1703 829 Gene3D Ribonuclease Inhibitor 151 241 IPR032675 -
Glsi04g1703 829 Pfam Leucine Rich repeats (2 copies) 202 234 IPR025875 -
Glsi04g1703 829 FunFam Leucine-rich receptor-like protein kinase family protein 121 219 - -
Glsi04g1703 829 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 245 369 - -
Glsi04g1703 829 SUPERFAMILY L domain-like 43 355 - -
Glsi04g1703 829 Gene3D Phosphorylase Kinase; domain 1 496 618 - -
Glsi04g1703 829 Pfam Protein kinase domain 542 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1703 829 Gene3D Transferase(Phosphotransferase) domain 1 620 827 - -
Glsi04g1703 829 SUPERFAMILY Protein kinase-like (PK-like) 516 808 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1703 Glsi-ChrGlsi04 60621939 60627202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1703 472 828 Miscellaneous Gene Families AT3G03770 59.444 4.23e-139 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Glsi04g1703 Pkinase 4e-18 CL0016