Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1674 ATGGTCACTCTTAAGCCAGTTTCTTCCGCTATATCTCTTACATTTTTGCTGATCCTGCTTTGCTTCTTTGAAATAGGTCTTGGCTTCAACCCCAAAAACTTGAACTTGTCTTTTGAGGGCACTCACTGGTTTTCTGCTGAAGCCACCTGGTACGGGGACCTAAATGGTAATGGAAGTGATGGAGGAGCTTGTGGGCAAACCAGTGAGAGTAGTGATAACAATTATTGTCCGGGAGGCCTTTGTGCGTCAGGATCTGCACATTTTTATCTAAGTGGAACTGCATTTGGTTCCATGGTGATTCGTGGATGGGAAGATGTTCTTCGCTGTGCCGGTGTTCTTGAAATCCATTATGCTCGAGATGCTTGA 366 0.4508 MVTLKPVSSAISLTFLLILLCFFEIGLGFNPKNLNLSFEGTHWFSAEATWYGDLNGNGSDGGACGQTSESSDNNYCPGGLCASGSAHFYLSGTAFGSMVIRGWEDVLRCAGVLEIHYARDA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1674 121 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 54 121 IPR007112 -
Glsi04g1674 121 PANTHER EXPANSIN-B3 75 119 - -
Glsi04g1674 121 SUPERFAMILY Barwin-like endoglucanases 39 119 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1674 Glsi-ChrGlsi04 58371371 58372877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1674 29 119 Expansin Gene Family AT1G65680 35.507 1.70e-12 60.5