Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1661 ATGCAATGCTCTCTACTTGCACTTTTTTCTCCCCTTTCATCCCACGATTATTTTTCGCTAGGTCTCGAAGCGATCAGCGAACAGCAATCAGCCATGGGTGATTCCCGGGTTCCTTTTGGGCAAGCCCCTAACTTCCGCCAGCCCACCGCTGGCATCATCAAGAGGCTTCGATTGGAGAATTTCATGTGCCATAGCAACCTGGAGATCGAGCTCGGAGAGGGGGTCAATTTCATCACTGGCCAAAATGGAAGTGGTAAGAGCGCAATCCTAACTGCATTGTGTGTTGCATTTGGTTGTCGAGCAAAAGGGACTCAAAGAGCATCGACTTTGAAGGATTTTATAAAAACAAGCTGCAGTTATGCTGTCATCCATGTAGAAATAAAAAATGAAGGAGAGGATGCTTTTAAGCCAGAAATATATGGTGATGTCATCACTGTAGAACGTAGGATATCTGAATCCACAAGCTCCATTGTGTTAAAAGACTATCAAGGAAAGAAGATTGTCAGCAGGAAAGCCGAACTCCAGGAAATGGTGGAGCACTTTAATATTGATGTGGAGAATCCATGTGTAATTATGAGTCAAGATAAAAGCAGAGAATTTTTGCATTCTGGGAATGATAAGGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTTGATGATCTTCTGGAAATCGTTTATAAAGGATTAGAACATGCTTTTGGACTTCTTGGTGGATTAGAGGCTACAATAAAGCCCATAGAGAAGGAGCTCAATGAGCTGAGAGTCAAGATAACAAATATGGAACATGTTGAACAAATATCTCGGCAGATTCAGCAGTTAAAGAAAAAGCTTGCATGGTCATGGGTTTATGATGTGGACAAGCAACTCCAGGAACAATGTTCAAGGATAGAAAAGCTAAAGGATCGGATACCCACTTGCCAAGCCAAAATTGATAACCAACTGCGTCTGGTTGAAGAATTGAGGGAACATTTACTCAAGAAGAAAGGCCAAATCACAAACATGTTTGAAAGGACATCTGAAGTGAAGCAGAAGAAGCAAAAATTACAACAATCTATATCTTTGGCTACAAAAGAAATACTTGAAAAAGAGCAAGAGTGCAAACGCATTACTACCTGTATTGAGAAGATGGTACAACATGTTAGGACTCTTGAACAACAGGTGAAGGATATTCATGAGAAGCACGTGAAAAATACTCAGGCTGAAGAATCTGAGATAGAAGAGAAACTGAAGGAACTCCAAAACGAGGTTGATGCTGCTGATTTAGCTCTGAGAAGGTTGATGGAAGAAGAGGCTGTACTAGCTGACAGTGTACAAAGACAAAGTAATGAAATCAGAAAGATTGATGATGAGATTAAAGATCATGAGAGAAGGTATCGCGATATCGTACATTCCATCCGGGAGCTTCAGCAACATCAAACCAATAAGGTTGCAGCTTTTGGAGGAGATAAAGTGATGAATCTTTTGCTTATTATTGAGAGATGCAATCGAAGGTTTAAGAGGTCACCTATTGGTCCAATTGGCGCCCATCTGAACCTGGTTAATGGTGATAAATGGGCTGTTGCTGTTGAGCATGCCATTGGAAAGATGCTCAATTCTTTTGTAGTGACTGATCATAAGGATTCTCTTCTTCTGAGAGAATGTGCAAGGGAAGCAAACTATGGTCATCTCCAAATTTTTATTTATGATTTTTCAACACCACGATTGACTATACCACCAGACATGCTTCCCCAAACAACACATCCATCAACTCTTTCTGTTTTACAGTCAGAGAATGCCACTGTGATTAATGTTTTAGTGGATATGGGGAGCGTTGAGAGACAAGTTCTTGTTAGGGATTATGATGCAGGAAAAGTGGTTGCTTTTGACCAAAGGATCTCAAATCTGAAGGAGGTCTTCACCTCGGATGGATATAGAATGTTTTCTCGTGGCTCAGTGCAGACAGTTCTCCCCCCAAATAAGAGGCAAAGAACTGGCAGACTATGTCGAACTTTTGACAACCAAATAAATGTTCTTGAAAATGATGCATCCCGTGAACAAGAAGCAGCTAATCACTTGAAAAGAAGTAAAAGGGAGGCAGAAGAAAAGCTTGAGGATCTTGATAAGAGGCTAAGACATGTAAAGAGATTGTGTTCAAATGCAGGGAAAGATTTGTCTTCTAAGCAATTAGCATTAGAAGATGAAATGAACCAGTATGCTGCAGCAAATCATTCATCACCAGCATCATCCGTTGATGAGATTCAACAAGAAATTTCAGAAGTCCAACATGATATACAAAGAAAGAAAGACTTGTTGAAAGAATGTCAGGGCAGGATGCATGAAGCTGCAGCAAAGGCAGGTGATCTGAAAGTATCATTTGAAGAACTATGTGCATCAGCACAAGAGGAGATAGGTGCCCTTGAGAGAGCAGAGAGTGAACTAATGCAGATTGAACGGGACATGCATTCAGCAGAAGAGGAGAAGGCTCATTATCATGGTGTCATGCAACACAAGGTCCTCCCAGATATCAAGGAGGCGGAGGCACACTATCTGGAGCTTAAGCAGCAGCGGGAGGAATACAACCGAAAGGCTTCGATAATTTGCTGTGAGAATGAACTTGAATCTTTAGGAGGTTGGGATGGAAGCACCCCAGAGCAACTCAGTGCACAGTTAGAAAGACTAACTCAAAGGCTTAAGCGTGAAAGCCAAAGATATTCAGAATCAATTGATGATCTTAGGATGCTCTATGATAAAAAAGAACGCTTGATTATAAGAAAGCAGCTAGTTTACAGAGCCTACCGAGAGAAGTTGGATGCTTGCCAGAGAGCCTTAGATTTACGAAGGAATAAGTTTCGCAGAAATGCAACTCTTTTGAGGCGCTTGTTGTCCTGGAACTTTAATGGCCATTTGGGAAAGAAGGGATTCAGTGGACTCATCACAGTAGATTATGAAGAGAAAACTCTTTCAATCAAGGTGCAGATGCCTCAAGATGCATCAGGAAGCACTGTTTATGACACTCGAGGGCTTTCAGGTGGGGAGCGTTCATTTTCAACATTATGCTTTGCACTAGCCCTTCATGATATGACAGAATCTCCTTTCCGGGCAATGGATGAATTTGATGTCTTTATGGATGCAGTCAGTCGAAAGATCAGCTTGGACACTCTTGTGGATTTTGCTGTGGGACAAGGATCTCAATGGATATTTATTACCCCACATGATATTAGTATGGTTAAGCAGGGGAACAGAATAAAGAAGCAGCAAATGGCAGCTCCTCGTTCTTGA 3270 0.4141 MQCSLLALFSPLSSHDYFSLGLEAISEQQSAMGDSRVPFGQAPNFRQPTAGIIKRLRLENFMCHSNLEIELGEGVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTSCSYAVIHVEIKNEGEDAFKPEIYGDVITVERRISESTSSIVLKDYQGKKIVSRKAELQEMVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLEIVYKGLEHAFGLLGGLEATIKPIEKELNELRVKITNMEHVEQISRQIQQLKKKLAWSWVYDVDKQLQEQCSRIEKLKDRIPTCQAKIDNQLRLVEELREHLLKKKGQITNMFERTSEVKQKKQKLQQSISLATKEILEKEQECKRITTCIEKMVQHVRTLEQQVKDIHEKHVKNTQAEESEIEEKLKELQNEVDAADLALRRLMEEEAVLADSVQRQSNEIRKIDDEIKDHERRYRDIVHSIRELQQHQTNKVAAFGGDKVMNLLLIIERCNRRFKRSPIGPIGAHLNLVNGDKWAVAVEHAIGKMLNSFVVTDHKDSLLLRECAREANYGHLQIFIYDFSTPRLTIPPDMLPQTTHPSTLSVLQSENATVINVLVDMGSVERQVLVRDYDAGKVVAFDQRISNLKEVFTSDGYRMFSRGSVQTVLPPNKRQRTGRLCRTFDNQINVLENDASREQEAANHLKRSKREAEEKLEDLDKRLRHVKRLCSNAGKDLSSKQLALEDEMNQYAAANHSSPASSVDEIQQEISEVQHDIQRKKDLLKECQGRMHEAAAKAGDLKVSFEELCASAQEEIGALERAESELMQIERDMHSAEEEKAHYHGVMQHKVLPDIKEAEAHYLELKQQREEYNRKASIICCENELESLGGWDGSTPEQLSAQLERLTQRLKRESQRYSESIDDLRMLYDKKERLIIRKQLVYRAYREKLDACQRALDLRRNKFRRNATLLRRLLSWNFNGHLGKKGFSGLITVDYEEKTLSIKVQMPQDASGSTVYDTRGLSGGERSFSTLCFALALHDMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVGQGSQWIFITPHDISMVKQGNRIKKQQMAAPRS 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1661 1089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 1079 IPR027417 -
Glsi04g1661 1089 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 38 1088 - -
Glsi04g1661 1089 Coils Coil 441 475 - -
Glsi04g1661 1089 SUPERFAMILY Smc hinge domain 461 628 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Glsi04g1661 1089 Coils Coil 839 859 - -
Glsi04g1661 1089 Gene3D - 52 248 IPR027417 -
Glsi04g1661 1089 Coils Coil 887 907 - -
Glsi04g1661 1089 Coils Coil 349 369 - -
Glsi04g1661 1089 Coils Coil 377 397 - -
Glsi04g1661 1089 Coils Coil 672 713 - -
Glsi04g1661 1089 Coils Coil 747 767 - -
Glsi04g1661 1089 Gene3D - 805 1085 IPR027417 -
Glsi04g1661 1089 Pfam RecF/RecN/SMC N terminal domain 53 1081 IPR003395 -
Glsi04g1661 1089 Coils Coil 786 823 - -
Glsi04g1661 1089 Coils Coil 399 433 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1661 50 1089 Structural Maintenance of Chromosomes family AT5G61460 61.827 0.0 1266