Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1659 ATGATCATGCCTCTATTTCTGATCTTTCTCCTACAGATAGCCACGGCGATTGCCACGGATCTCCGACCTGGGTTTTACTGGAATACATGCCCAGAAGCTGAATTGATAGTCCGAGAGGTCATGAAAAAGGCCCTCGTTAGGGAACCCCGAAGTGTTGCCTCCGTTATGCGCTTCCAGTTCCATGATTGCTTCGTCAACGGGTGCGATGCTTCCATGTTACTGGATGACACACCAACCATGCTTGGAGAGAAACTGGCCCTCTCCAATATAAACTCTCTTAGATCATATGAAGTGATTGACGAAGCCAAGGAAGCCCTCGAAAGGGTGTGTCCGGGAGTTGTTTCTTGCGCAGATATCATAATCATGGCAGCTAGAGACGCTGTTGCCCTGACAGGAGGACCCAATTGGGAAGTAAAGCTGGGAAGATTAGATAGCTTATCTGCTAATCAAGAAGACTCAAATAACGTCATGCCCAGCCCAAGAGCCAATGCAAGTTCCCTTATTTATCTCTTTCAGAAGTTTAACCTGAGCATCAAAGACCTTGTAGCACTTTCAGGATCTCACTCTATTGGCCAAGCTCGTTGTTTTTCCATCATGTTTAGGCTATACAACCAATCGGGGTCTGGAAGACCTGACCCTGCCATTGAGCTAAAGTTTAGAGAAAAGCTAGACAAGCTATGTCCACTTGATGTGGACCAAAATGTGACGGGGGACCTTGATGCCACACCGCAAGTCTTTGATAACCAGTATTTCAAGGACTTAGTTGCTGGGAGGGGTTTTCTGAACTCGGATCAAACACTTTTCACTTTCCCTCAGACCAGAGGGTTGGTGAGGCTCTATAGCAGGGATCAAAGTGAATTTTTCAAAGCTTTTGTGGAAGGGATGTTGAAAATGGGTGACTTGCACTCTGGCTGGCCCGGTGAGGTTCGAAGGAATTGCAGGGTGGTTAATGGCCGGCCGTCTCATTTGCTGTTGGAGTCTCCACAGAAAATGAAAATTAGCTATGCAGTTGTTTTCAATGAGACTTATTATTGCCATACGTATGATCGAGGTGCCCTATCTTGGGCAAATACCTATTATTGCGGATATATCAGTTGTTGA 1101 0.4614 MIMPLFLIFLLQIATAIATDLRPGFYWNTCPEAELIVREVMKKALVREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSYEVIDEAKEALERVCPGVVSCADIIIMAARDAVALTGGPNWEVKLGRLDSLSANQEDSNNVMPSPRANASSLIYLFQKFNLSIKDLVALSGSHSIGQARCFSIMFRLYNQSGSGRPDPAIELKFREKLDKLCPLDVDQNVTGDLDATPQVFDNQYFKDLVAGRGFLNSDQTLFTFPQTRGLVRLYSRDQSEFFKAFVEGMLKMGDLHSGWPGEVRRNCRVVNGRPSHLLLESPQKMKISYAVVFNETYYCHTYDRGALSWANTYYCGYISC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1659 366 Pfam Peroxidase 37 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 Gene3D - 24 317 - -
Glsi04g1659 366 PANTHER PEROXIDASE 72-RELATED 17 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 CDD secretory_peroxidase 21 316 IPR033905 GO:0004601|GO:0042744
Glsi04g1659 366 FunFam Peroxidase 158 298 - -
Glsi04g1659 366 ProSiteProfiles Plant heme peroxidase family profile. 20 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 FunFam Peroxidase 24 165 - -
Glsi04g1659 366 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 Gene3D Peroxidase, domain 2 158 298 - -
Glsi04g1659 366 SUPERFAMILY Heme-dependent peroxidases 20 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Glsi04g1659 366 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g1659 366 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1659 Glsi-ChrGlsi04 54494603 54518639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1659 7 327 Peroxidase AT2G22420 73.994 0.0 504