Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1626 ATGTTTGGCCATATTGCCCTTATTTCAAGCATCTCAGTGTCCAACTCGCCCAGAGGGCGCCGTCTTGATTGCTCCAGCCTTTTCCAGTTACCAACCTTGCCTTCTCTGGGAATGGGTGCTTTCAATGCTTTTAGATTTTCCAAACTTATCTCATGGAAACCCACTGGCAGGGTTCAGCAAACCCTAGCGGGCTGTGTGGAGCGGAGAGGCAAGACTTTACACTCTGGAAATGCTTCAACGGTGAAACTGTGTCCGGGACTAGCAGGTGAAGGGAGGTACTTTGATTTTCGGTCCATTTTGATACCAGCATCGATTGATTTCGCTCAAGAATCACCTCTCTGTACAACATTGTGTAAAGATGGTTTTAGAATACGAACCGTTGAGCACTTGCTTTCTGCTTTGGAGGCGGCTGGTGTTGATAATTGCAGAATCGAGATAGACAATTTAGATTTTGAGGGACATGATGCCGAGATTCCTATATTTGATGGGTCAGCAAGTGAATGGCTGGCAGCAGTGGGAGAAGTTGGTTTAAAGGTGGCAACTGATCATCATGGCAATAGTAGTGAAAAATTAGCACCACATTTGAATGAACCAATGTATGTTTGGAGGAATGATTCTTTTGTTGCTGCATTTCCTTCAACAATGGCTCAAGTAACTTATGGCATTAGCTTTCCACAGGCACTTGCTATTGGCTGCCAATGGTTTTCTACAACCCCCTTGGACAATTTGGTTTACTCCAAACAGATAGCTTTGTCAAGAACCTTCTGTATCTATGAGGAGATTGAGCAAATGCGCCGTGCTGGACTGATAAAAGGAGGGTCTCTAGAAAATGCTATTGTTTGCAGTACCCGTAATGGTTGGTTGAATCCTCCTCTGCATTTCGATGATGAACCATGTCGCCATAAGGTCTTGGATCTTATTGGTGATCTCTCCCTTTTTGCTCAGTTTGGGAATCAAGGACTTCCAGTGGCACATGTAGTAGCTTACAAGGGTGGCCATGCATTGCATGCTGATTTGGTACGCTGCCTAATAGGAACGTGA 1041 0.4486 MFGHIALISSISVSNSPRGRRLDCSSLFQLPTLPSLGMGAFNAFRFSKLISWKPTGRVQQTLAGCVERRGKTLHSGNASTVKLCPGLAGEGRYFDFRSILIPASIDFAQESPLCTTLCKDGFRIRTVEHLLSALEAAGVDNCRIEIDNLDFEGHDAEIPIFDGSASEWLAAVGEVGLKVATDHHGNSSEKLAPHLNEPMYVWRNDSFVAAFPSTMAQVTYGISFPQALAIGCQWFSTTPLDNLVYSKQIALSRTFCIYEEIEQMRRAGLIKGGSLENAIVCSTRNGWLNPPLHFDDEPCRHKVLDLIGDLSLFAQFGNQGLPVAHVVAYKGGHALHADLVRCLIGT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1626 346 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 59 344 IPR004463 GO:0008759|GO:0009245
Glsi04g1626 346 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 39 344 IPR004463 GO:0008759|GO:0009245
Glsi04g1626 346 SUPERFAMILY Ribosomal protein S5 domain 2-like 58 178 IPR020568 -
Glsi04g1626 346 Gene3D lpxc deacetylase, domain 1 57 184 IPR015870 GO:0008759|GO:0009245
Glsi04g1626 346 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 59 343 IPR004463 GO:0008759|GO:0009245
Glsi04g1626 346 SUPERFAMILY Ribosomal protein S5 domain 2-like 197 344 IPR020568 -
Glsi04g1626 346 Gene3D lpxc deacetylase, domain 2 194 346 IPR011334 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1626 47 343 Carbohydrate Esterase AT1G25054 64.646 2.11e-144 409