Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1608 ATGGCCAAGGCATCTTCTCTGTCCATTCTTTTCTGTGCTGTGTTCATTGCCGGCATAACCACGTTCACAGTTGCCACTCCATCTAATTTCATCAAGTCCTCCTGCAGCACCACCCAATACCCAGCTGTTTGTGTGGAATCTCTCTCAGTCTACGCCTCCACAATCCAACAAGATCCACACCAATTGGTCCAAACTGCCTTGTCTCTTAGCCTAAACAGCACCCTCTCGACCAAGGCTTTTGTGTCAAAGCTTAACAAATTCAGGGGACTCAAGGGCAGAGAGAATGAAGCTCTGGGTGATTGCTTGGAAGAGATCAGTGACAGTGTGGATAGGCTCAGCCGTTCTCTCAAAGAGCTCAACCTGTGCAAAGCCAAAAGTCGGGATTTCGCATGGCACATAAGCAACGTGGAGACCTGGGTTAGCTCTGCTATTACAGATGAAAGCACCTGCACCGATGGGTTCGCGGGAAAGGCAATGAATGGAAAACTTAAATCTTCCATCAGGGCAAGAATGCTTCATGTTGCTCAGGTCACTAGTAATGCTCTTTCATTGATTAACCATTACGCCTCAAATCACTGA 579 0.475 MAKASSLSILFCAVFIAGITTFTVATPSNFIKSSCSTTQYPAVCVESLSVYASTIQQDPHQLVQTALSLSLNSTLSTKAFVSKLNKFRGLKGRENEALGDCLEEISDSVDRLSRSLKELNLCKAKSRDFAWHISNVETWVSSAITDESTCTDGFAGKAMNGKLKSSIRARMLHVAQVTSNALSLINHYASNH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1608 192 CDD PMEI-like_3 33 190 - -
Glsi04g1608 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 184 - -
Glsi04g1608 192 SMART PMEI_2 26 184 IPR006501 GO:0004857
Glsi04g1608 192 Pfam Plant invertase/pectin methylesterase inhibitor 29 184 IPR006501 GO:0004857
Glsi04g1608 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 188 IPR035513 -
Glsi04g1608 192 NCBIfam pectinesterase inhibitor domain 6 188 IPR006501 GO:0004857
Glsi04g1608 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 188 IPR035513 -
Glsi04g1608 192 FunFam Pectin methylesterase inhibitor 1 26 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1608 Glsi-ChrGlsi04 40134772 40135350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1608 31 187 Carbohydrate Esterase AT3G14310 30.380 8.44e-22 90.1