Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1593 ATGATGAAGAAGAGACCCAATCCCTCTTTTACTTCTCGCAACATAGCATCACAAAATCGGCACAAACAGATCACCTTCCCGCCTAGAACACCGACAAAGCACATACTGAGTACACATGGTGGTTGTGAGTCTGCATCTGCCATCTGGGTGTTAGTGGCCTTAGATGTTGCTAGGCAATATTTATTTCCTTATCAAATACATCTATCAAGTATGGTTACATCACCAAGTACGTGTGAGATAGTGGAATCAAGAGAAGATATAATATCTGAATTCAGAATAGATGAAAAAGCTGAGAGTAGTTGTGCCCAAAAATCAGGAAAAAAATATTCTATAGAGGATGATATTAATCGTCTTTTCCAAGCTATTGACTTTAAAAATTCAGCTAGAGGTTCTAGTACGCCACGTTCACAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTAAGCTCATCTCAGGCATCCGGAATTGGGATTTCAGAGCCTGTAAGTTTGAAGCAGGCACTTAGAGGACTGTGCATATCTCAGGCATCTGAGATGGCTGCTTTGAAGCGACTATCAAAGCCATCCAGTTCATCAAGAGTATCTGAGGCTGGAACTATTAAAAAGTTATATACAGCAGTGGTAGATGAGGGGAAAGGGAAAATGGTGGAAATCTCCCTTGTACCAGAGACTTCTGCACCTTCTGATAAATTGCCCAGGGAAGATAAATCAAGTTCAAGTGCTGATCATTCTACTCCTTTTGTTTATGCAGCAAACCCAAAAGAAATCACAACTGGGTTAGCATCCCGAGATCAGATTGTTCCGCTTACATCAGAGGTTGAGAGTCAGAAGTTAGTCACAGTAACTGGGAACCCAACGCTTGCAAATTCATCCCCATTTGTCTGTGAAAGTGAGGAAGTGCCTGAGGTCAGGATGGTTTCAGCTTCCTCAAGCAAAGCTTCCCTCTGTTCTTCAATGCCAGATAAGGGGCAGGAAGCAAAGTTGCATTCTGAAGCTTATCCACCTAGCTCTAGCACTATTAGTGGGGTGGATAAATCCACAAGCAGTAATATATGTCTAGCAAAGCCAATGTTCAGGAACAAGAGCTTCCTTAAGAAAAAAGTAAAGCAAGATTTATGTTCTGCTTCAAGCAGCTCCACTCTGTGTACCAGAAAAGTTGACAATGATTTGGATCTTAGTAAAAGTAATTTGGTCAAGGAGACTGGCAAATCTAATTTGAAGCATGAAATGAAAGAAAATGAGAAATTGTCTCCCAGCAGTTCAAATCATAGCATGGAAGTTAACTCAATTAATGTTGGCATCGATTCAGGCAAGCCTGGTTTCAGTTTGAATTGCAATAAGAGAACTAAATTTCTAGTGACAAAAATTGATGAGAAATCAAGATCAAAAGAGAAAGGTGAATTCTCTCATAGCTCAAAAAGTAGCATTGGTGAGTACAGTAGTAGTACAAGCATAAGTGAAGAGAGCAATCTAAGTGGCTCTAGTCGCAGTGGCCACAGGCCTCACATGTCAAAACATTTGAGATGGGAAGCTGTTCGTGTTGTTCAGCAGCAGCATGGTAACTTAAGTTTGAGGCACTTCAAACTACTTAGGAGGCTTGGTTGTGGGGACATTGGAACCGTTTATCTTGCAGAACTAATTGGTACAAGCTGCCTTTTTGCTTTGAAAGTGATGGACAATGAGTTTTTGGCTAGCCGGAAGAAAATGTTCAGGGCCCAGACTGAAAGAGAGATCCTGCAGATACTGGATCATCCTTTTCTTCCTACACTTTATTCCCATATTTCGTCAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTGCATGTGCTGCGCCAGAGGCAACCGTGTAGGAGTTTTTCAGAACAAGCAGCCAGGTTTTATGTTGCAGAAGTTCTCCTTGCCCTGGAGTATCTGCATATGCTAGGAGTTGTATATCGAGACCTGAAGCCAGAAAATATCCTAGTCCGAGAAGATGGCCACATAATGTTGACAGATTTTGACTTGTCACTTAGATGTTCTGTCAATCCTATGTTAGTCAAGTCATCTTCACCAGAAGTGGATCCTGCAAAGAAGATGTCAAGTCCCTGTGCTGAGGCTAGCTGCATACACCCTTTCTGTCTACAACCTAATTGGCAAGTATCCTGCTTCACTCCGATTCTTTTATCTGCTGGTGCAAAATCTCGAAAGATGAAATCCGACATAGCTTCTCAGGTTGGTCCGTTGCCACAACTTGTAGTGGAACCAACCAGTGCCCGTTCTAACTCTTTTGTTGGAACTTATGAATACCTTGCGCCAGAGATCATCAAAGGTGAGGGTCATGGGAGTGCTGTAGATTGGTGGACTTTCGGTATACTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGTACAGGAAATGAGGAGACATTAGCCAATGTTGTGTCACAGAGCCTTAAGTTCCCAGATGCTCCTATTGTGAGTTTTCACGCTAGAGATTTGATCAGAGGGTTGTTGATAAAGGACCCTGAAAATCGCTTAGGTTCTGTAAAAGGTGCGGCTGAGATAAAACAGCACCCTTTCTTTGAAGGCCTCAACTGGGCTCTGATAAGATGTGCAGCACCACCTGAGTTACCCAAATTTCGTGATTTTGGCAGTTGTGCACCATCTATGGCTTCACAGAAGGAGAATGCGAATGAATTAGAGGATACAGAAGATTGCGAGGAGTTTGAACTGTTTTAG 2736 0.4225 MMKKRPNPSFTSRNIASQNRHKQITFPPRTPTKHILSTHGGCESASAIWVLVALDVARQYLFPYQIHLSSMVTSPSTCEIVESREDIISEFRIDEKAESSCAQKSGKKYSIEDDINRLFQAIDFKNSARGSSTPRSQKSALKRPIKVSSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRVSEAGTIKKLYTAVVDEGKGKMVEISLVPETSAPSDKLPREDKSSSSADHSTPFVYAANPKEITTGLASRDQIVPLTSEVESQKLVTVTGNPTLANSSPFVCESEEVPEVRMVSASSSKASLCSSMPDKGQEAKLHSEAYPPSSSTISGVDKSTSSNICLAKPMFRNKSFLKKKVKQDLCSASSSSTLCTRKVDNDLDLSKSNLVKETGKSNLKHEMKENEKLSPSSSNHSMEVNSINVGIDSGKPGFSLNCNKRTKFLVTKIDEKSRSKEKGEFSHSSKSSIGEYSSSTSISEESNLSGSSRSGHRPHMSKHLRWEAVRVVQQQHGNLSLRHFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKMFRAQTEREILQILDHPFLPTLYSHISSDKLSCLVMEYCPGGDLHVLRQRQPCRSFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPEVDPAKKMSSPCAEASCIHPFCLQPNWQVSCFTPILLSAGAKSRKMKSDIASQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGILLFELLYGKTPFKGTGNEETLANVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSCAPSMASQKENANELEDTEDCEEFELF 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1593 911 MobiDBLite consensus disorder prediction 399 415 - -
Glsi04g1593 911 PANTHER FLIPPASE KINASE 1-RELATED 345 879 - -
Glsi04g1593 911 MobiDBLite consensus disorder prediction 330 345 - -
Glsi04g1593 911 ProSiteProfiles Protein kinase domain profile. 526 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1593 911 FunFam serine/threonine-protein kinase D6PK-like 755 878 - -
Glsi04g1593 911 MobiDBLite consensus disorder prediction 7 32 - -
Glsi04g1593 911 Gene3D Phosphorylase Kinase; domain 1 524 605 - -
Glsi04g1593 911 MobiDBLite consensus disorder prediction 399 423 - -
Glsi04g1593 911 MobiDBLite consensus disorder prediction 220 244 - -
Glsi04g1593 911 CDD STKc_phototropin_like 524 883 - -
Glsi04g1593 911 MobiDBLite consensus disorder prediction 471 497 - -
Glsi04g1593 911 SUPERFAMILY Protein kinase-like (PK-like) 499 879 IPR011009 -
Glsi04g1593 911 SMART serkin_6 526 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1593 911 Gene3D Transferase(Phosphotransferase) domain 1 606 674 - -
Glsi04g1593 911 MobiDBLite consensus disorder prediction 461 502 - -
Glsi04g1593 911 MobiDBLite consensus disorder prediction 326 345 - -
Glsi04g1593 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Glsi04g1593 911 MobiDBLite consensus disorder prediction 1 32 - -
Glsi04g1593 911 Pfam Protein kinase domain 757 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1593 911 Pfam Protein kinase domain 527 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1593 911 FunFam serine/threonine-protein kinase D6PK-like 610 677 - -
Glsi04g1593 911 FunFam Serine/threonine-protein kinase D6PK-like 524 609 - -
Glsi04g1593 911 Gene3D Transferase(Phosphotransferase) domain 1 754 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1593 Glsi-ChrGlsi04 36710216 36714063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1593 456 911 AGC Kinase Gene Family AT2G36350 68.240 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi04g1593 Pkinase 2.2e-35 CL0016