Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1587 ATGGAGGGCCCCCCTTCCAACGATCTTTGTTCGGTGTGCCATGGAAACTTCATCACTCCTTGCCAAGCCAATTGCTCTCACTGGTTTTGCGGAAATTGTATTATGCTTGTATGGCATCATGGATCAGCTGTCCAGCCCTGTAAATGCCCCCTATGTCGTCGTCAGATTACTTTGCTGGTTCCAACTGAGGACTCTTCACGGCAGCGTTACAACCCTGAAGTTGCTCAGGTTCTAGAACAAATTGAAATGTATAATCGATTATTTGGTAGTCGTGCAACTGGTCTTGTTCAGAGAATGCAAGATCTTCCTTTTCTCTTGCGAAGGCTCCTACGGGAACTAGTGGATCCTCACAGAACCCTTCCTCTTGTCATTAGGGCACGTGTCTATATTGCAATGATACTCAGCTTAGTCTACATTATCAGCCCTGTTGACATTATTCCAGAAGGGATATTAGGAGTAGTTGGTTTATTGGATGACCTCCTTATTGTGCTTATCTGCTTCCTCCACGTTGCTACCCTTTATAGATCAGTACTCTATTTTCGTCATGGAGGTTCCTGA 558 0.4498 MEGPPSNDLCSVCHGNFITPCQANCSHWFCGNCIMLVWHHGSAVQPCKCPLCRRQITLLVPTEDSSRQRYNPEVAQVLEQIEMYNRLFGSRATGLVQRMQDLPFLLRRLLRELVDPHRTLPLVIRARVYIAMILSLVYIISPVDIIPEGILGVVGLLDDLLIVLICFLHVATLYRSVLYFRHGGS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1587 185 Pfam Protein of unknown function (DUF1232) 130 164 IPR010652 -
Glsi04g1587 185 PANTHER UNCHARACTERIZED 2 182 IPR038896 GO:0061630
Glsi04g1587 185 SUPERFAMILY RING/U-box 6 62 - -
Glsi04g1587 185 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Glsi04g1587 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 100 IPR013083 -
Glsi04g1587 185 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1587 35 185 C3H Transcription Factor Family AT1G72175 78.808 9.20e-72 212