Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1509 ATGGCTGACGGTGGGTCACAAAGGGGTAGACGATGGGAAACGGTGCTAGCTGACAGTGGGTCACAGTTGCTTGTGGGGGAGAAGGCTTTGCGAGCTGTAAGATACGATGACATGGATGATGTTGTAAGCTTAGCATCCAGAGGGGTTCCACTTGATTCCAAGGATTCACAGGGGAGAACAGCTCTTCCCATGGTTGCAGCTAATGGACATTTTGACATTATGGAATATTTAATAAGTAGAGTAGTGCATATTCATCCATCTATGTATAGTGGAAATCTGTTTAATGTTTAG 291 0.4467 MADGGSQRGRRWETVLADSGSQLLVGEKALRAVRYDDMDDVVSLASRGVPLDSKDSQGRTALPMVAANGHFDIMEYLISRVVHIHPSMYSGNLFNV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1509 96 Pfam Ankyrin repeats (many copies) 35 78 IPR002110 GO:0005515
Glsi04g1509 96 SUPERFAMILY Ankyrin repeat 31 82 IPR036770 -
Glsi04g1509 96 Gene3D - 25 92 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1509 Glsi-ChrGlsi04 19820637 19823017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1509 37 84 MAP Kinase Kinase Kinase AT3G59830 37.500 7.65e-06 40.8