Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1499 ATGAAGTCTGTGGATTCACGTGTATATAGTGTAGTTTCACTTGCAAAAGGTGAAGGACTTTTGGGCTTTGCGCTCATTGTAGCCTTCAAAGGAGACTGCGGATTAGGATATTGTAGGGAGTTTTTGCTGTTTGTGTTTGCCTGGCCCATGGATCCATTTGATGATATTTTTCCAGAAGCTCCTGTTGCACGTGCTCGGGTGGGTGGCAAGTTTATTCCCAAGGCCAAGTCCAAACAGCTGCCTCAAAAGGAAATATCTGTATCAAAACATGCAACCTCATATAATGATGAAAAGAATGAACATGTTGCATCATCATCCACCAGCTTGGACAGAGTAGGAAATTTTCCTATTGAATGTAATAATCAAGTTGATTCAACTGAAGAATTTCTGAAATCTACACCAGTAGAAATCCCAAATTTGGATAATACTAAAAATCCTCAAATGGGGAATTTTCAACAAATTAATGTGAATGGAGATGATGCAGTCTTGGCAGATGCTCTGCCTTCAATAATTACAGCATCTGAAGTCAATAGTGATTGGAATACTACTAATTTTCCCAAAGCAGCAAATGAGGCAGATCCTGTAGGTTTTGATGTGGGCCTAGCTACTGACATTATTCCTGGGACCAACCTCAGTAATGCTTGCTCAACTGTTACTGAAACAGAAGAACCTTCTAAATACTGGGAAGGTTCATTTCTTGATGGCAACAAAAGTTTGGAACCTATTGATACCTCATTGCAAGTTGGCCAGGATGTGGGATCCAAAGGTGCTTCAGGTTATAAGGCTGCAGAGAACATTCATTCAGATTCTAACTTTGAGAGAGCAGGAGAGGTGGAGTCTGCGGAGTTTGAAGTGGATCCTTTCAGCAACACTCTCCCCGATCCTGGTGTTAGGAATGCCCGTAAGTTTCAACCTAAGATTAAACCACGGCCTAGAGTAGGCACTGCAGCGGCTGTTGCTTCTGCTTCATCTAATATTATGGAAAAACCTGCTGAGTTGCTTGTTTCTTGCACAAATAAAATTCAATTTTTTCAGTCTGATGGTGGTAGCAGTGACACACTAACCCAATCAACCAACTCATCTTTACCCACGTCAGAGATCCTTAGGACAGCAGATACATCCCATATTTTTGATTATACATGTTCAAGTATTCCATTCTCGGAAGACAAAAGAAGCTTGGCAGCAGTAATCCCTTCACAACCAGATTCTCTGAGTGCCATGCTTTCAGAGGCCGCAGCTCATAATGGGGCTAAAGATTGGCCTTCTAGCGTTGGAAAGTCATCTGGAGAGACTGGAGACATATTTTCTGGGTTGGAAAGCCTTGATGACTTTCTCACTCAAGCTGCCACTGGTACAGGAAAATCGGCTCTTCATTCTTTCCACGAGAAGGGAACAGAGGAAAATTTTGTCATTCCTGCTTCTAGCTCTGTTAATTCTTCACTTTATGGGGCATGTGATGCTGTCCAAGTTCAAAAATGCCCTGACTATAATACTACCCAAGATTCCTTAACCTTCAAGGAAGCTGCAGTCTTCAATGAGAGTGATACTCACACTAATGGAAGGTTGGGAAGAGAGGAAGTTGTGGGATTGAATCCTGCCTGTCCTCTTGATGACTCCCTTGATTATTCATCTATGAAATCTGGCCCAGATCCAACTTTTGAAATCCCTGTGCATGAAGAACTGGAAAATGCTGGAGATAGTCCCAGTTTTGGTGATTTTCTGCATGTCGAAGATGATGTACCAGGAGGAAAAGTTGATGCTAGTGAGAAAGAAAAATATGCCACTATGTCAAGCTCTCCTAGGAAGCATAAATCTTTTGTAGCTCATGAGGAGGATAAAGTTGGTAAACCTTCAAGGAAGCTGAGAAAGCGAGTAACTCATAAACCTGTTGATCCAGCAGAGAATGAGGAGGATGATGACCTTGACCCTACTTATAAATCTAATATAGATGAATCTGAAGAACGTGATGATGAATATGAATTGGATAATGCATCCAAGAAGAAAAGAGCACCGACAAATTCCAAGAAGAAATCTATGGCTAAAAATGGAAAATCACCTCAAAAGCGTAAGAAAGCTCATGGGGATTTAGATAGGTCTACTAAAGAACCTCCTAAAAAGTTCTCTCATTCGACCCGACGAAGAAAAAGATTGGACAAGGCTTTGCTGGAAACTCCTGAAGATGAACTAGATCCTCAAACATTGCAGATAAGGGATATTATTTTACTTGCAGAATATAGGGAGCGATTAGCGAAAAAGGAGGCAACAACATCGAAAACTTCTTCCAACAATCAAAGAGATGGAGATTCCCTTCATGAGGCTGCTGCTCATAATGAAGAGATCTTAGGTTCAGAAGATGGAAGAGGCTCAGATGATGATCAAGCAAGTGAAAGGGTTCCATTAGCTTCCTCTTTATTCAATTACCAGTCTTTCATGGACAAAACCCCTAGTGGAAAATGGTCAAAACAAGACACTGAACTGTTTTATGAGGCAGTTCAGCAGTTTGGCACAGATTTTTCTATGATACAACAACTTTTCCCTGGTCGAACACGTCATCAAGTTAAGTTGAAGTACAAGAAGGAAGAACGGCAACATCCTTTACAGCTAACTGATGCTGTGAATAATCGTGGGAAAGATTTTTCTCAATTTAAATTGGTGATTGAGCGGCTGAAGCAAGCTTCTGCTAAGGCAGAAGAAGAACCTATTAGAGATGCTTCAGTTGGCATGACAGAGGAAGAGGTGGAGGACTTGACACCTTATACCAATGAGGAGGTTGCAAAATCTGAGCAGGACGCAGCTGTGCAAGATCAGGAAGATAATGGGTCATTTCATAGTCCTGAGAAATCTGATGAAAGTGATGATGATTTCCAAAGATGGTGTCAATATAAAAGCGATTATTAG 2898 0.4124 MKSVDSRVYSVVSLAKGEGLLGFALIVAFKGDCGLGYCREFLLFVFAWPMDPFDDIFPEAPVARARVGGKFIPKAKSKQLPQKEISVSKHATSYNDEKNEHVASSSTSLDRVGNFPIECNNQVDSTEEFLKSTPVEIPNLDNTKNPQMGNFQQINVNGDDAVLADALPSIITASEVNSDWNTTNFPKAANEADPVGFDVGLATDIIPGTNLSNACSTVTETEEPSKYWEGSFLDGNKSLEPIDTSLQVGQDVGSKGASGYKAAENIHSDSNFERAGEVESAEFEVDPFSNTLPDPGVRNARKFQPKIKPRPRVGTAAAVASASSNIMEKPAELLVSCTNKIQFFQSDGGSSDTLTQSTNSSLPTSEILRTADTSHIFDYTCSSIPFSEDKRSLAAVIPSQPDSLSAMLSEAAAHNGAKDWPSSVGKSSGETGDIFSGLESLDDFLTQAATGTGKSALHSFHEKGTEENFVIPASSSVNSSLYGACDAVQVQKCPDYNTTQDSLTFKEAAVFNESDTHTNGRLGREEVVGLNPACPLDDSLDYSSMKSGPDPTFEIPVHEELENAGDSPSFGDFLHVEDDVPGGKVDASEKEKYATMSSSPRKHKSFVAHEEDKVGKPSRKLRKRVTHKPVDPAENEEDDDLDPTYKSNIDESEERDDEYELDNASKKKRAPTNSKKKSMAKNGKSPQKRKKAHGDLDRSTKEPPKKFSHSTRRRKRLDKALLETPEDELDPQTLQIRDIILLAEYRERLAKKEATTSKTSSNNQRDGDSLHEAAAHNEEILGSEDGRGSDDDQASERVPLASSLFNYQSFMDKTPSGKWSKQDTELFYEAVQQFGTDFSMIQQLFPGRTRHQVKLKYKKEERQHPLQLTDAVNNRGKDFSQFKLVIERLKQASAKAEEEPIRDASVGMTEEEVEDLTPYTNEEVAKSEQDAAVQDQEDNGSFHSPEKSDESDDDFQRWCQYKSDY 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1499 965 MobiDBLite consensus disorder prediction 751 771 - -
Glsi04g1499 965 SUPERFAMILY Homeodomain-like 817 865 IPR009057 -
Glsi04g1499 965 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 298 965 - -
Glsi04g1499 965 Pfam Myb DNA-binding like 809 892 IPR039467 -
Glsi04g1499 965 FunFam Predicted protein 819 898 - -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 893 909 - -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 893 956 - -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 716 733 - -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 562 736 - -
Glsi04g1499 965 Coils Coil 879 899 - -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 940 956 - -
Glsi04g1499 965 ProSiteProfiles SANT domain profile. 814 862 IPR017884 -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 670 688 - -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 689 706 - -
Glsi04g1499 965 Gene3D - 819 881 - -
Glsi04g1499 965 SMART sant 815 863 IPR001005 -
Glsi04g1499 965 MobiDBLite consensus disorder prediction 577 618 - -
Glsi04g1499 965 CDD SANT 818 859 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi04g1499 Myb_DNA-bind_7 1.8e-28 CL0123