Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1493 ATGCTGACCCGAAAGGTAGAGGTCACAAAAGAGTCTCCTTCGGCGAAGAAATCGAAGCCCCTGCTTCCCTCACTGGACAGTGAGAAGACGTCGCTTCGTGAGGACGAGGACATTGCAATACTGAAGGGTATGCTTGAATATTGGGCCAAGAAAGTAACCGACCCACTCAGTGATATTAGTGGGTTTCACGAGTTCATGAAAGAATCTTACCGCCTTGATATTTCCAAAGCACAGTTGGTGGGTAGGATTGGAAGGTTGAAGAAGTATCAGGACAACGCAGAGAAGTGGAAAAACGATGAGGACCTTACTTTCAAGAAACCCCATGACAAGAAATCCTATGAATTGTCACAGAGAATTTGGGCCTCCGAAACTGCTGCTACCCTCAAGGCTGGTCTGAACAGGATTTATGTGAAATTGGGAACACTAATCATGGTGTTAGGGATGACACTCGATGTTGATACATCAGAGTCAGATACGGACTCAGAAAGTTGA 492 0.4573 MLTRKVEVTKESPSAKKSKPLLPSLDSEKTSLREDEDIAILKGMLEYWAKKVTDPLSDISGFHEFMKESYRLDISKAQLVGRIGRLKKYQDNAEKWKNDEDLTFKKPHDKKSYELSQRIWASETAATLKAGLNRIYVKLGTLIMVLGMTLDVDTSESDTDSES 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1493 163 PANTHER BNAANNG10740D PROTEIN-RELATED 8 130 IPR007592 GO:0006355
Glsi04g1493 163 Pfam Protein of unknown function, DUF573 34 120 IPR007592 GO:0006355
Glsi04g1493 163 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1493 Glsi-ChrGlsi04 19257348 19257839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1493 34 121 GeBP Transcription Factor Family AT4G00390 37.079 3.59e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Glsi04g1493 DUF573 4.6e-21 CL0123