Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1483 ATGATGAAGGACTTGGCCCCCCACCAAAGAAATGGAAAGGAAATTGTCAGACTACCTTTAACTTCAGTTACAACAAATTACAATTGCTATTTAGCAGATATCCTTGCTGCTTTTGATGATGCAATTGCTGATTGGGTCTATATTATGTTAATTTCCATTGGCGGATACGTAAACAGCTACTATTTGGATGACCCTGTAGCAATTGGATCTTTTCAGGCCATAAAAAATGGAATTTTGACTATAGCGTTTACTGGTAATTATGGACCACAACAAGGAGGATTGGTTAATTTCGCACATTGGTTAGCAACTGTTGTAGCTACCAGTATTGACAGGGAATTTGTTTCAAATTTGGTTCTTGGAAATGGGATCCAATTATTTTGCCAGTTCCTCAAGTTAATGCTATACCCAGGCTCCTTAAATTCAGAGGAAGTTAGAGGGAAAATTGTTTTGTGTGAAGTCAGCTCTGGGGGCTTTGAAATTCAGAAAGCAGGTGGGTTGGGTATCATATTCCTTAACCGACCATACAAAAATTATGCAAAGTCTTACCCCTTACCAACAGCGAGCATCGATGATGAAGAGTTCTCTAGAGTCTTACAATACATCCAATCCTCCAACAAATCAAAGGTAACCATAATGTTTAGTGAGACTAGAAAGGACACCCAAGGGCCTTATGCTGCAAGTTTCTCAGCATATGTTATGGATCCAGAAAAGCATGAAAATGAGAATGAATTTGCTTATGGGTCTAGCCTCGTTAATCCTGTGAAAGCAGTGGATCCTGGGCTAGTTGTCAATGCTTCTGAGGCACATTATATAGAAGATAGGCATGAGATCATCACCAATTTTATTAGGACTGTTACTAATGTTGGTCCAGCTAACTCAACCTATGAAGCTATAATTGATGTGCCAAACTTTCTCAAAGTAACAACGGATCCATCCACTCTTGCCTTTTTTATTGTTGGTGAAGAAAAAATCTTCATTGTTGAAGCTAGGGGACCAAAGATATCTCAGATGTCAGATCAGAGTCAGTGTGCATCAACCACCAAAGGGAGAGGTTGCGGTCAGCCTTCCATCACAAAAGAAGTTAGTAATAATGTCCCCATTGATGACTCTTCCTTGCACTTCAGGATTAAAGACTTGACGTTGCTTGGCTCTTGGAATTTCAAACAACTTACAAATGTGCTGTCAGGGCGAGTTTTAAAGATAGATGTGAAGTTTGTGTGGAGATTAGATGGAGTAGTCCAGAGGATGGTTGGACTAAACTACGATGGTGCTTCGAGAAGTCATCCTGGGAATGCTGGTAGTGGGGATCTTCATAGACTATACTTTGGAAATTGGCAGCTTGGTTATAGTAGGCACCTTGGTGTTTACTTATCCTTCACTGCTGAATTGTGGGACATATTAGACGTGTTAAGGTTAGCTTGGAAGGAGGATTATAGGATATTAATCATTGAAAGTGATTCTAGGGAATCCAATGTGGTGGCTAACTGGTTGGCAAACTGGGGTGCTGATCAAGAGGTTCAGCTCCAGTTTTGGCAGACTCCTCCTCCTGGAATTTGTAATTTGCTTTTTCTTTTTCTTATGTTTCAAGGGCCCCTTTTTCCCCGAGTAGTTAGCTTGTAG 1620 0.4049 MMKDLAPHQRNGKEIVRLPLTSVTTNYNCYLADILAAFDDAIADWVYIMLISIGGYVNSYYLDDPVAIGSFQAIKNGILTIAFTGNYGPQQGGLVNFAHWLATVVATSIDREFVSNLVLGNGIQLFCQFLKLMLYPGSLNSEEVRGKIVLCEVSSGGFEIQKAGGLGIIFLNRPYKNYAKSYPLPTASIDDEEFSRVLQYIQSSNKSKVTIMFSETRKDTQGPYAASFSAYVMDPEKHENENEFAYGSSLVNPVKAVDPGLVVNASEAHYIEDRHEIITNFIRTVTNVGPANSTYEAIIDVPNFLKVTTDPSTLAFFIVGEEKIFIVEARGPKISQMSDQSQCASTTKGRGCGQPSITKEVSNNVPIDDSSLHFRIKDLTLLGSWNFKQLTNVLSGRVLKIDVKFVWRLDGVVQRMVGLNYDGASRSHPGNAGSGDLHRLYFGNWQLGYSRHLGVYLSFTAELWDILDVLRLAWKEDYRILIIESDSRESNVVANWLANWGADQEVQLQFWQTPPPGICNLLFLFLMFQGPLFPRVVSL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1483 539 Gene3D - 416 514 IPR036397 GO:0003676
Glsi04g1483 539 Gene3D - 263 352 - -
Glsi04g1483 539 CDD PA_subtilisin_like 136 211 - -
Glsi04g1483 539 CDD RNase_H_like 419 530 IPR044730 -
Glsi04g1483 539 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 230 328 IPR045051 -
Glsi04g1483 539 SUPERFAMILY Ribonuclease H-like 415 502 IPR012337 -
Glsi04g1483 539 SUPERFAMILY Subtilisin-like 25 121 IPR036852 GO:0004252|GO:0006508
Glsi04g1483 539 MobiDBLite consensus disorder prediction 338 357 - -
Glsi04g1483 539 Gene3D Peptidase S8/S53 domain 23 109 IPR036852 GO:0004252|GO:0006508
Glsi04g1483 539 Gene3D Peptidase S8/S53 domain 219 230 IPR036852 GO:0004252|GO:0006508
Glsi04g1483 539 Pfam Fibronectin type-III domain 278 335 IPR041469 -
Glsi04g1483 539 Gene3D - 110 124 - -
Glsi04g1483 539 Gene3D - 135 218 - -
Glsi04g1483 539 Pfam Reverse transcriptase-like 420 489 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1483 Glsi-ChrGlsi04 18989159 18995057 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1483 29 239 Subtilisin-like Serine Gene Family AT3G46850 33.333 2.83e-34 135