Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1469 ATGAAGCTTTCCTTCTCCATCCCATCAAAATCCTCATCTAAGTCAAACCCTATCAGGCTATCTCAGAACTTCGACGAGGCTGCCAACAACAAAGATGGAAGCGATAAAGCCAGAGACTACGTTAAAGAGTTCGATGCATCCAAATCTGCCAACAACAGAGATGGAAGCGCTAAAGCCAGAGAGTACGTTAAAGAGTTCGATGCATCCAAATCCCCAACTGATCCTAACAAATCCACCAACATTGTTATTGCCCCTATACAGAATGAATGGAGGCCCCACAAGAGGATGAAGAATCTAGACCTACCCATCACTGAATCCAACGGAAACCAGCTGGGATTTGAGCTGGATACGTCGGTCGCCGTGGAACCGGGTTCGGAGATGTCTTATGGCCTGAATCTTCGGCAGACGGGGAAGACTGATGGGGTCGGTAAGCAATCTGCTGCTGGCAGTGGTGATGATAATGATGAGGATAATAGAAGGTCACGACATGTTCCTGTGGAGGCCGTGGTGCTGCAGAAATTTAAAGACGATATGAAGAAGTTACCGGAGGATCAAGGATTTGAGGAGTTCAAAGATGTCCCTGTTGAGGGTTTTGGTGCAGCTCTGCTTGCTGGGTATGGATGGCGTGAAGGAATGGGTATTGGAAAGAATGCCAAGGAGGACGTGAAAGTTGTACAGTACGAGAGGAGGACTGCCAAAGAAGGGTTGGGTTTTGTTAGTGCCCTTCCTGGTATGCGAAGTTCGAAGGAAGGGGAAATACCACAGGAGCAAGGCAGAGACGGCTCTTTTGTTGGGAAGATTGTTAGAATAGTTGGGGGCAGATATGCAGGCTTGAAGGGTAAATTTGTGCGGAAAGTCGAAGATGGTGGGGTTATATTAAAGCTTTTGAAGACTGAAGAGGAAGTGAAAGTGCACGATGAGGAAATTGCAGAACTGGGGTCTATTGAAGAGGAGAGGTGTTTGAAGAAATTGAAGGAGTTAAAGATTCAACATGTCGATAAAGATAAATATTCTAAAAATAAACGCAGCAGAGATGAGGGAAGGAGAGGTCGTGGTGAAGTTGAAATGGACATTAAAAGATATACTTGGAATGGAAAGCAGGGGAAGAAAGAACTTTCGTGGCTTACAAGTCACATTAGGGTCAGGGTTATTAGCAAAGATTTCAAAGGAGGACGACTATATATGAAGAAAGGAGAGATTCTGGATGTTGTTGGGCCTACTACTTGTGATATATCTATGGATGACAGCAAGGAGATCATCCAAGGGGTTTCCCAAAGCTTTCTTGAGACTGCTCTCCCCCGCTGTGGAGGTCCAGTTCTTGTATTATATGGTAAACATAAGGGCATTTATGGGAGTCTAGTTGAGAAGGATTTGGATCGAGAAATTGGTGTTGTTAGGGATGCTGATACCCATGCACTGGTCAATGTGAGGCTTGAACAAATTGCAGAATATATAGGGGATCCAAGCATCTTGGGATACTGA 1482 0.4507 MKLSFSIPSKSSSKSNPIRLSQNFDEAANNKDGSDKARDYVKEFDASKSANNRDGSAKAREYVKEFDASKSPTDPNKSTNIVIAPIQNEWRPHKRMKNLDLPITESNGNQLGFELDTSVAVEPGSEMSYGLNLRQTGKTDGVGKQSAAGSGDDNDEDNRRSRHVPVEAVVLQKFKDDMKKLPEDQGFEEFKDVPVEGFGAALLAGYGWREGMGIGKNAKEDVKVVQYERRTAKEGLGFVSALPGMRSSKEGEIPQEQGRDGSFVGKIVRIVGGRYAGLKGKFVRKVEDGGVILKLLKTEEEVKVHDEEIAELGSIEEERCLKKLKELKIQHVDKDKYSKNKRSRDEGRRGRGEVEMDIKRYTWNGKQGKKELSWLTSHIRVRVISKDFKGGRLYMKKGEILDVVGPTTCDISMDDSKEIIQGVSQSFLETALPRCGGPVLVLYGKHKGIYGSLVEKDLDREIGVVRDADTHALVNVRLEQIAEYIGDPSILGY 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1469 493 Gene3D - 378 432 - -
Glsi04g1469 493 MobiDBLite consensus disorder prediction 1 37 - -
Glsi04g1469 493 PANTHER G PATCH AND KOW-CONTAINING 1 489 IPR045166 GO:0000398
Glsi04g1469 493 Pfam G-patch domain 182 238 IPR026822 -
Glsi04g1469 493 ProSiteProfiles G-patch domain profile. 195 241 IPR000467 GO:0003676
Glsi04g1469 493 SMART G-patch_5 193 239 IPR000467 GO:0003676
Glsi04g1469 493 MobiDBLite consensus disorder prediction 133 162 - -
Glsi04g1469 493 SMART kow_9 432 459 IPR005824 -
Glsi04g1469 493 SMART kow_9 261 288 IPR005824 -
Glsi04g1469 493 MobiDBLite consensus disorder prediction 1 28 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1469 374 460 C2H2 Transcription Factor Family AT1G55460 34.483 2.65e-06 47.8