Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1452 ATGCTTGGGAAAGGTAGCTTGGGGACATTTTATAAGGCTGTGCTTGATGGTGGTTTTACCGTGGCTGTTAAAAGGCTAAAGGACTTAAACCCACGCCCAAGGAATAAGTTCGAGCAGCACATAAACATAATTAGAAAAGTGAAGCACCCCAACATTGTCAGTTTCAAAACCTATTACTATGCCAAAGAAGAAAAACTTCTCGTCTATGATTATCTCCCCAACGGAAGCTTGCATTTCCTTCTTCACAATTTGTCTTTGAAGAATTTCATTAGATTGGACCATAAGAATAAGCTTGGTGCTAAGAGTGGGCTTGCTCGTATTTATGCAAAATATCGTGCAGCGAAAATACTTCTTGAGAATGTCAAATCTTCCACTGTGCTTCTTGACAAGAATGGTGTTGCTTGCATCTCTGACTTTGGCTTGTCCCTGCTAGAACCTTGTTCATACCATCGCAAGATTGGGTGA 465 0.4086 MLGKGSLGTFYKAVLDGGFTVAVKRLKDLNPRPRNKFEQHINIIRKVKHPNIVSFKTYYYAKEEKLLVYDYLPNGSLHFLLHNLSLKNFIRLDHKNKLGAKSGLARIYAKYRAAKILLENVKSSTVLLDKNGVACISDFGLSLLEPCSYHRKIG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1452 154 SUPERFAMILY Protein kinase-like (PK-like) 1 148 IPR011009 -
Glsi04g1452 154 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
Glsi04g1452 154 Pfam Protein kinase domain 2 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1452 154 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1452 154 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 145 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1452 Glsi-ChrGlsi04 18124034 18124592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1452 1 144 Receptor kinase-like Gene Family AT2G36570 63.087 1.61e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi04g1452 Pkinase 2.4e-16 CL0016