Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1447 ATGGAAGTGATCTCTAGAGAAACCATCAAACCCTCTTCTTCAACTCCTCTTGATCTCAGAATTTACCCCCTCTCCTTCATAGATCACATAATTTCTCGTTACTATGTGCCATTAGTTTTCTTTTACCCAAACAAGGGTTCTGATGATACGTTACTGAATGAAAGATCCAAAATGCTCAAGAAATCGCTATCTGAAGTTCTAGCCATGTATTATCCATTTGCTGGTAGGTTCAAAGATCAAGTTTCCATTGACTGCAATGACGAGGGAGTGAAACTGTCGGTCACTAGCATCAAACGAAAGCTCTCAGAGATCCTTGAAAACCCAAAGGAAGAATTTTTAAATCCTTTATTCCCAGATGAATTGCAGTGGAAGTATATGGATTCAAGTGGAAGCATCCTAGCCATCCAAATAAACCATTTTGCCTGTGGAGGAATGGCAATCAGCATTTGTATGTCTCATAAGGTTAGCGATGCTTCGACTCTCTTCAACTTCGTCAAAGACTGGGCTACTATAACCCGAAAATCTGGTGAAGAAAAGGAATTAATCTTCCCCGTACTTGACGGTGCATTTGTATTCCCACTCAGCGATTTACCAATTTACACAGAAATGGAGTTTGGGAAATGCAATACGGTGAGCAAAAGGCTTGTATTAGATGCCTCAAAGATTGAGTCCCTCAAGGCCATGGTATCTCGCAGAGTGGAAAATCCCTCGCGAGTACAAGTTGTAACTGCACTAATTTACAAATCCGCAGTTTCAGCTTTGAGACACACTTATAAGTCTCCAAACCAAACCACATGGCTCCGCCTTGCTGTGAATTTACGTGCAAGAATGGTTCCTCCGTTGTCTGAGAAGTCCATAGGAAATATGGTTTGGCCTTATTTGGTATCAAGTACAATGGAAGCAGAATTACACGAGTTGGTAAGCAAAATGCAAGAAGGGTTGCGTGATTTTTGTGATAAACATGTCACAAACTTTGGGAGAAACGAGTTGTCGTTCATCTCAGAGTGTCTAAAAGAAGCAACTTTAGTGACCCCAGACCAAAATCAGATTATGTTTTTTGTTTCCAGCTGGTGCAGATTTCCAGCGTACGAAGCAGATTTTGGGTGGGGAAAACCAATATGGGTGACTACTTCTAGCTGTCCCGCGAAAAACAACATCATTTTGATGGATACAAGTGATGGGGATGGGATTGAAGCGCATGTAAGTATGGAGAACCAAGATATGGCCTTGTTTGAGCGGAATGTGGAACTCCTTCAATATGCTTTCCTTTATCCAAGCGTTGGAGTTGATCCCATTGAAAGCCTCTAA 1308 0.4159 MEVISRETIKPSSSTPLDLRIYPLSFIDHIISRYYVPLVFFYPNKGSDDTLLNERSKMLKKSLSEVLAMYYPFAGRFKDQVSIDCNDEGVKLSVTSIKRKLSEILENPKEEFLNPLFPDELQWKYMDSSGSILAIQINHFACGGMAISICMSHKVSDASTLFNFVKDWATITRKSGEEKELIFPVLDGAFVFPLSDLPIYTEMEFGKCNTVSKRLVLDASKIESLKAMVSRRVENPSRVQVVTALIYKSAVSALRHTYKSPNQTTWLRLAVNLRARMVPPLSEKSIGNMVWPYLVSSTMEAELHELVSKMQEGLRDFCDKHVTNFGRNELSFISECLKEATLVTPDQNQIMFFVSSWCRFPAYEADFGWGKPIWVTTSSCPAKNNIILMDTSDGDGIEAHVSMENQDMALFERNVELLQYAFLYPSVGVDPIESL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1447 435 PANTHER F21J9.9 2 421 - -
Glsi04g1447 435 Pfam Transferase family 2 417 - -
Glsi04g1447 435 Gene3D - 208 421 IPR023213 -
Glsi04g1447 435 Gene3D - 1 197 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1447 Glsi-ChrGlsi04 17987729 17989036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1447 9 413 Monolignol Biosynthesis Gene Families AT5G48930 25.000 1.10e-31 124