Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1433 ATGAAAATAAGTGCTGCACATAAGTATTTTCGGCAGCTAATCAATGCAGTTGATTTTTGTCACAGCAGAGGTGTGTACCACCGAGATATAAAGCTAGAGAACCTTTTGTTGGATGAAAATAGGAATCTTAAGGTGTCTGATTTTGGGTTAAGTGCTCTAGCTAAATCCAAGAGGCAGGATGGCTTACTGCATACTACTTGTGGCACACCTGCCTATGTTGCTCTTGAAGTCATCAAAAGGAAATGGTATGATGGTGCCAGAGCTGATGTTTGGTCTTGTGGAGTAGTCCTGTTTGTCTTATTAGCAGGTTATCTCCCTTTTCATGATTCAAACTTGATAGAGATGTATAGGAAGATTGGCAAAGCAGAATTTAAATGCCCTAATTGGTTCTCACCAGAAGCATGCAGACTAGTATGCAAGATATTGGAACCAGATCCTGATACTAGGATTTCCATAGCTATGATTAAGGAATGTTCTTGGTTCAAGACAAGACCAAATGCTAGGCATAAAAAACCTAAAGTGGAAAAAAAGACTGTATCGTTGTCAGGCAACAACCCTTCTGATCAAAGCAATGAAACTGATAGTGACAGTATAGCTGTAGAAGCAAGGGAAGAGTCATTTGTGCCCACCAGTATAAATGCATTTGATATTATCTCCCTTTCGGCTAGTTTTAATCTTTCTAGATTCTTCAGTGACAGTTTTCAGAAGAGAGAAGCAAGATTTGCTTCAAGAAAACCTGCATCAGTAATCATCTCTAAGCTGTAA 765 0.3908 MKISAAHKYFRQLINAVDFCHSRGVYHRDIKLENLLLDENRNLKVSDFGLSALAKSKRQDGLLHTTCGTPAYVALEVIKRKWYDGARADVWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFSPEACRLVCKILEPDPDTRISIAMIKECSWFKTRPNARHKKPKVEKKTVSLSGNNPSDQSNETDSDSIAVEAREESFVPTSINAFDIISLSASFNLSRFFSDSFQKREARFASRKPASVIISKL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1433 254 Pfam NAF domain 209 254 IPR004041 GO:0007165
Glsi04g1433 254 ProSiteProfiles NAF domain profile. 207 231 IPR018451 GO:0007165
Glsi04g1433 254 Pfam Protein kinase domain 4 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1433 254 FunFam Maternal embryonic leucine zipper kinase 3 179 - -
Glsi04g1433 254 MobiDBLite consensus disorder prediction 172 196 - -
Glsi04g1433 254 SUPERFAMILY Protein kinase-like (PK-like) 4 229 IPR011009 -
Glsi04g1433 254 Gene3D Transferase(Phosphotransferase) domain 1 1 212 - -
Glsi04g1433 254 Gene3D Kinase associated domain 1, KA1 213 254 - -
Glsi04g1433 254 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 254 - -
Glsi04g1433 254 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1433 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Glsi04g1433 254 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1433 254 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1433 Glsi-ChrGlsi04 17494025 17494789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1433 1 254 CBL-interacting serine-threonine protein kinases AT5G58380 62.030 3.20e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi04g1433 Pkinase 6e-41 CL0016