Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1432 ATGGAAGGTTCTGACAATACCAAATCGAAGGATTATTACAAAGTGTTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTAAGTTACCGAAGGCTTGCACTGAAATGGCATCCCGACAAGCACAAAGATGACAGTGCTGTTACTACAAAATTCCAAGAGATCAATGAAGCTTATAGTGTGTTGAGTGATCCTGCCAAACGTATTGAATATGATTTAACTGGAATCTATGAGATTGACAAGTATAGTTTGCAGGAATATCTTGCCAGATTTAAGGGGATGATACTTACCTGTAATGGACTTGGTATCAATCACACTCAAATAAGGTCACAACAATCAATTGAAAGTATTGAATCCCATGATAATTAA 372 0.3575 MEGSDNTKSKDYYKVLEVDYDATDENIKLSYRRLALKWHPDKHKDDSAVTTKFQEINEAYSVLSDPAKRIEYDLTGIYEIDKYSLQEYLARFKGMILTCNGLGINHTQIRSQQSIESIESHDN 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1432 123 Gene3D DnaJ domain 1 90 IPR036869 -
Glsi04g1432 123 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
Glsi04g1432 123 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Glsi04g1432 123 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 107 - -
Glsi04g1432 123 FunFam Chaperone protein DNAj, putative 3 90 - -
Glsi04g1432 123 Pfam DnaJ domain 11 73 IPR001623 -
Glsi04g1432 123 CDD DnaJ 11 65 IPR001623 -
Glsi04g1432 123 PRINTS DnaJ domain signature 48 68 IPR001623 -
Glsi04g1432 123 PRINTS DnaJ domain signature 13 31 IPR001623 -
Glsi04g1432 123 PRINTS DnaJ domain signature 68 87 IPR001623 -
Glsi04g1432 123 PRINTS DnaJ domain signature 31 46 IPR001623 -
Glsi04g1432 123 SUPERFAMILY Chaperone J-domain 8 97 IPR036869 -
Glsi04g1432 123 SMART dnaj_3 10 68 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1432 Glsi-ChrGlsi04 17454307 17461451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1432 1 73 C2H2 Transcription Factor Family AT1G74250 39.744 1.84e-11 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1432 04 17454307 17461451 Glsi04g1432 04 17454307 17461451 ECH