Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1427 ATGGGAGGTGGAGGGACTGCAATTGGAATGGGAAGTTTCAATGAAGAAGACAAGGAGGGAGAGAAAGGAGTGAAGTGGCCGCCTTGGCTGCGTCCACTTCTCCAAACGAGTTTCTTCGTTCAATGCAAAGTCCACGCAGATTCCCACAAGAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTTTGCTCTGCCTGTCTGGCTTCCCACAGAGACCACAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAGACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGTGTCACCAATACCTGCCAGGTCTGTGAGCGCAGCCTTCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGCAAGATCGTTGGAACATCCAAGAACTTCCGGAAGAAGAAAATGTTAGCAGAGCCAGATGGGTCTGATGGTGAAGAGTCAATGAATGGCCATAGCAGTGGAAATGTGAGGAACAAAATCCTGAGCTTTACGCCATCTACGCCACCACCAACAGCTGTGAATTACAGAACTGCCAAGAGGAGGAAGGGAATTCCTCATAGATCTCCAATGGGGGCAGGGCTTATTATACAGTACTGA 687 0.4731 MGGGGTAIGMGSFNEEDKEGEKGVKWPPWLRPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHRDHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKNFRKKKMLAEPDGSDGEESMNGHSSGNVRNKILSFTPSTPPPTAVNYRTAKRRKGIPHRSPMGAGLIIQY 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1427 228 CDD Bbox2 42 81 - -
Glsi04g1427 228 MobiDBLite consensus disorder prediction 1 23 - -
Glsi04g1427 228 Pfam PLATZ transcription factor 82 153 IPR006734 -
Glsi04g1427 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 22 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1427 Glsi-ChrGlsi04 17363882 17365655 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi04g1427 PLATZ 3.6e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g1427 04 17363882 17365655 Glsi04g1427 04 17363882 17365655 ECH