Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1424 ATGGCAGAAGAGGATTCGAAGCCTTTGACTTATATTCCAGAGACGATATTGAAGAAGAGAAAAAGCAGCGAAGCATGGGCGTTGAGGAAAAAGGAGCAATTTGAGCAGAAGAAGTTCCAAACGAAGAAGAGCAAAGACTATGTCAAAAAGCCCGAGGATTTCATCTTAGAGTATCGTAGCAGGGAGCTCGACCTTATTAGAATGAAACGGAGGGTCAAGAGGAAACGACCAGCACTGTTAACACCAAAGTCAAAATTGTTAATAATTATTCGAATACAAGGAAAAAATGACATGCATCCAAAAACCCGAAAGGTTTTATACAGCTTGAGATTGAGAAAGATATTTAGTGCTGTCTTTGTGAATGCATCTGAGGGAATTATGGAGAAGCTGCAGAGGGTGGAACCATATGTTACCTATGGATATCCAAATCTTAAAAGCATAAAGGAGCTAGTTTACAAGAAGGGACATGCGAAAATAGGCAATCAGAAAGTTCCTTTGACAGACAATAACATTATTGAACAGGAATTAGGGAAATATGGCATTTTATGTATAGAAGACATGGTGCATGAAATTGTTAATGTTGGTCCACATTTCAAGGAAGTTGCCAGTTTTTTGTCGCCCTTTGAACTCAACAAGCCAACAGGAGGATTGCAAGGATCAAAATCCTTGTACAAGGATGGTGGAGACACAGGAAACCGTGAGGATCTCATAAATGAATTAATTGATAAAATGAATTAG 738 0.3875 MAEEDSKPLTYIPETILKKRKSSEAWALRKKEQFEQKKFQTKKSKDYVKKPEDFILEYRSRELDLIRMKRRVKRKRPALLTPKSKLLIIIRIQGKNDMHPKTRKVLYSLRLRKIFSAVFVNASEGIMEKLQRVEPYVTYGYPNLKSIKELVYKKGHAKIGNQKVPLTDNNIIEQELGKYGILCIEDMVHEIVNVGPHFKEVASFLSPFELNKPTGGLQGSKSLYKDGGDTGNREDLINELIDKMN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1424 245 Gene3D - 86 245 IPR036919 -
Glsi04g1424 245 PANTHER 60S RIBOSOMAL PROTEIN L7 9 245 IPR039699 -
Glsi04g1424 245 FunFam 60S ribosomal protein L7 86 190 - -
Glsi04g1424 245 NCBIfam 60S ribosomal protein uL30 13 245 IPR005998 GO:0000463|GO:0003735|GO:0022625
Glsi04g1424 245 Pfam Ribosomal L30 N-terminal domain 12 75 IPR012988 -
Glsi04g1424 245 SUPERFAMILY Ribosomal protein L30p/L7e 86 245 IPR036919 -
Glsi04g1424 245 Pfam Ribosomal protein L30p/L7e 87 137 IPR016082 -
Glsi04g1424 245 CDD Ribosomal_L7_archeal_euk 86 245 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1424 Glsi-ChrGlsi04 17251699 17257311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1424 1 245 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 54.656 4.92e-90 264