Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1401 ATGGAGAGCAAGAGCGATTTGGAGAGAGATCTAGATAGCATGAGGAAGTATTATGGGCGGGGAAAGACCAGGGAAGCATCTTGGAGAAAATCACAGCTAATAGGGTTGCGTAGTTTCCTCATGGAAAAAGAAGAAGAAATCTTGAAAGCTCTCATGCAAGATTTAGGAAAACATCATGTTGAAGCTTTCAGAGACGAGGTAGGAACGCTGCTAAAGTCCTTAAATTTCGCATTGAAGAATCTGAAAGACTGGATGTCAGGAAACAAGGCTAAATTGCCACAAATAGCGCTACTTACTAGTGCAGAAGTTGTTCCAGAGCCTTTGGGTCTGATCCTCATTATCTCATCTTGGAATTTTCCCATAGGACTGTCGTTGGAGCCATTGATAGGAGCAGTAGCTTCTGGAAACACTGTGGTCCTAAAGCCTTCAGAGTTGTCTTCTGCGTGTGCTTCTCTACTAGCCTCTTCCCTCACCAACTACCTAGACAGTAAAGCCATTACGGTTATCCAAGGAGGACCTGAAGTTGCCCAACAACTACTCCACCAAAGATGGGACAAAATCTTCTTTACAGGAAGTGCACGTGTAGGGCGGATTGTGATGTCTGCAGCCGTGAAGCATCTGACTCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGATTCCCTTTCGTCTTCTTGGGACAGACAGGTGGCTATAAAACGAATCATTGTGGGAAAATTTGGGACTTGTGCTGGCCAAGCATGCATAGCAATCGATTATATCCTCGTAGAAAAGAGATTCACTTCAACACTGGTGGAATTGATGAGGGTCTGGATCAAAAATATGTTCGGCGAAAGTCCAAAAAAATCCAACACTATTGCGAGGATAATTAATAAACAGCATTTTTTGAGATTGAAGAATCTTCTTTCTGATCCAGTGGTGAAAGAATCTGTGATTTATGGAGGCTCAATGGACGAAGAAAACCTATTTATTGAACCAACAATCTTGGTGGATCCCCCACTGGACGCAGCAATCATGGCAGACGAAATTTTTGGCCCATTGCTTCCAATTATTACTCTGGAAAAGATCGAAGATAGTATTAAATTCATAAGCTCAAGGCCTAAGCCTCTCGCCATCTATGTCTTCACCAAAAACCCTACACTTGAGGGAAGAATAGTCTCTGAAACATCATCTGGAAGTGTGACCTTCAACGATGCAATTGTACAATATGCGGCGGATACAATCCCATTTGGAGGAGTTGGTGAAAGTGGGTTTGGAAATTACCATGGCAAGTTCTCCTTTGACACATTCAGCCATCGGAAGGCCGTAATCAGAAGAAGTTTCCTCACTGAGTTTTGGTTTAGGTTTCCACCATGGAATCTCAACAAGTTTCAACTACTTGAGGTTGCTTACAATTTAGACTATTTCGGATTGCTCCTTGTCTTGCTGGGCTTAAAGAGATCATCACGAACATCATCAGCTTGGGCTCCGGCGTGA 1485 0.4337 MESKSDLERDLDSMRKYYGRGKTREASWRKSQLIGLRSFLMEKEEEILKALMQDLGKHHVEAFRDEVGTLLKSLNFALKNLKDWMSGNKAKLPQIALLTSAEVVPEPLGLILIISSWNFPIGLSLEPLIGAVASGNTVVLKPSELSSACASLLASSLTNYLDSKAITVIQGGPEVAQQLLHQRWDKIFFTGSARVGRIVMSAAVKHLTPVTLELGGKCPAVVDSLSSSWDRQVAIKRIIVGKFGTCAGQACIAIDYILVEKRFTSTLVELMRVWIKNMFGESPKKSNTIARIINKQHFLRLKNLLSDPVVKESVIYGGSMDEENLFIEPTILVDPPLDAAIMADEIFGPLLPIITLEKIEDSIKFISSRPKPLAIYVFTKNPTLEGRIVSETSSGSVTFNDAIVQYAADTIPFGGVGESGFGNYHGKFSFDTFSHRKAVIRRSFLTEFWFRFPPWNLNKFQLLEVAYNLDYFGLLLVLLGLKRSSRTSSAWAPA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1401 494 PIRSF ALDH 1 475 IPR012394 GO:0006081
Glsi04g1401 494 Pfam Aldehyde dehydrogenase family 4 439 IPR015590 GO:0016491
Glsi04g1401 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Glsi04g1401 494 PANTHER ALDEHYDE DEHYDROGENASE 3 476 IPR012394 GO:0006081
Glsi04g1401 494 SUPERFAMILY ALDH-like 6 456 IPR016161 GO:0016491
Glsi04g1401 494 FunFam Aldehyde dehydrogenase 216 419 - -
Glsi04g1401 494 FunFam Aldehyde dehydrogenase 15 219 - -
Glsi04g1401 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1401 Glsi-ChrGlsi04 16586071 16592948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1401 4 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.542 0.0 560