Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1356 ATGCAGCAAGATCAGCTGAAGAAGGGTATTAAAGAGTTGGACTTTTTCACTGAGTATGGGGATGTGAATAGATACAAGATTCTTGAAGTTATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCAGCAATTGACACACACACAGGGGAAAAAGTAGCAATAAAGAAGATTCATGATGTTTTTGAGCATATCTCTGATGCCATTAGAATCCTTCGTGAAGTCAAGTTACTAAGGCTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATAATGTTACCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTCTTTGAACTCATGGAGTCTGATCTCCACCAAGTCATTAAAGCTAATGATGACTTGACCCGTGACCATCATCAGTTTTTTCTTTATCAAATGCTACGTGCATTGAAATATATGCATACAGCGAATGTGTATCACAGAGACCTCAAGCCCAAGAATATATTGGCAAACGCAAATTGCAAACTCAAAGTTTGTGATTTTGGACTGGCAAGAGTTGCATTTAATGATTCTCCGACAACAATATTTTGGACAGATTATGTTGCTACAAGATGGTACAGAGCCCCAGAACTGTGTGGATCCTTCTCTTCTAAGTATACGCCAGCTATTGATGTGTGGAGCATTGGTTGCATTTTTGCTGAGTTGCTGACAGGAAAGCCATTGTTTCCTGGTAAAAGTGTTGTACATCAATTAGATTTGATTACTGATCTTCTAGGGACACCATCGCCAGAAACTATTTCAGGAGTTCGAAATGAGAAAGCAAGAAAATACTTGGTGGAAATGCGGAAAAAGGGCCCTGTGCCTTTTGAACTGAAATTTCCAAATGCAGATCCATTGGCACTTCGCCTGTTGCAAAGGCTTCTAGCATTTGATCCCAAAGATCGGCCAACTGCTGAAGAGGCACTGGCAGATCCTTATTTCAAGCGCTTGGCCAAAATTGAGAGAGAACCTTCTTGTCAACCAATTTCAAAGTTTGAATTTGAGTTTGAGAGACGAAGGGTGACAAAGGAGGATATTAAAGAACTAATATATCGTGAAATACTGGAATATAATCCTCAGCTGCTTAAAGATTACATGAATGGAACTGAAGGCCCAAACTTCCTCTATCCTAGTGCAATAGGTCAATTCAAAAAGCAGTTTGCTTATCTTGAGGAAAATGGTGGTAAAGGTGGCCCATTCACTCCTCCAGAAAGGAAGCATGTTTCCCTTCCAAGGTCCACCGTTCACTCAAGTACAATCCCTCTTAATACACAGCTAAATTTTGCTTTGTATGAGAACAAGCCAAATGCAGAAGAGGCATCTAAGAGTTTGAGAGCAGCAGAATCAAATTCTGGAAGTCAATTAAGGGGTTCGCGACCTCCACCAAGAGTGCCAACAGCTAAACCGGGGAGAGTTGTAGGGCCAGTTGTAGTACCCTATGACAATGGGAGAAGCATAAATACTTATGACCCAAGGATCTTTTATCAAAATGCTTGTCCCCAAGCCGCCGCTGGTTCTCCTCACTGTTTTATGAGAGCTCAGTCCACTGCCCCAGAGAAGATTAGGTCAGGGACACACAATGATTTCTCACTAGGCAAGCATCAACTCCCATCCCAGCAGAGTAACTTGCCAGCCAGACCTACAGTTGACCTCAATACCAACCCATACTGCCAGCAACCCAAGATAGATAAGTTCGATAAACCAATCACAAGCATTGATGCAAAACTGCTGCAGGCACAATCTCAGTTTGGTGCCGTTGGTGTTACAGCAGTAGTCATTGCAGCTCACCGGCATTCTGGGGCTGTTCAGTATAGATTGTCGTAG 1830 0.4213 MQQDQLKKGIKELDFFTEYGDVNRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRDHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDSPTTIFWTDYVATRWYRAPELCGSFSSKYTPAIDVWSIGCIFAELLTGKPLFPGKSVVHQLDLITDLLGTPSPETISGVRNEKARKYLVEMRKKGPVPFELKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKRLAKIEREPSCQPISKFEFEFERRRVTKEDIKELIYREILEYNPQLLKDYMNGTEGPNFLYPSAIGQFKKQFAYLEENGGKGGPFTPPERKHVSLPRSTVHSSTIPLNTQLNFALYENKPNAEEASKSLRAAESNSGSQLRGSRPPPRVPTAKPGRVVGPVVVPYDNGRSINTYDPRIFYQNACPQAAAGSPHCFMRAQSTAPEKIRSGTHNDFSLGKHQLPSQQSNLPARPTVDLNTNPYCQQPKIDKFDKPITSIDAKLLQAQSQFGAVGVTAVVIAAHRHSGAVQYRLS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1356 609 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Glsi04g1356 609 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Glsi04g1356 609 FunFam Mitogen-activated protein kinase 15 118 - -
Glsi04g1356 609 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1356 609 FunFam Mitogen-activated protein kinase 111 339 - -
Glsi04g1356 609 MobiDBLite consensus disorder prediction 441 473 - -
Glsi04g1356 609 MobiDBLite consensus disorder prediction 396 418 - -
Glsi04g1356 609 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi04g1356 609 CDD STKc_TDY_MAPK 24 361 - -
Glsi04g1356 609 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1356 609 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1356 609 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Glsi04g1356 609 MobiDBLite consensus disorder prediction 445 459 - -
Glsi04g1356 609 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 347 - -
Glsi04g1356 609 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1356 Glsi-ChrGlsi04 15579700 15586178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1356 1 606 MAP Kinase Gene Family AT1G53510 69.775 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi04g1356 Pkinase 6.1e-67 CL0016