Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1353 ATGTTGAAGGGCGGTCCGGTGGACAGAGAGACAGCAAGCAGTCTGACTCAGGAAGTGCAAGCGGTGTGGCCAAAGGCGGAAGAGGTAGATGCATGGAGGGACCAGGAGATCAAATTTCCAAGCGATAATATTCATCAATTGGTGAGTTCCTCATTCCGCCATTACCTACCTGAGTTTCTAGAATCCATGTTTTGTTTTCTCTGCAAAACCATCCCTTTTCGGAGGCATATTATCAACCGCATCTTTCCAACAACATTTCAAGAACTGATTTTTGTACAAAAGCTATGGGTCACTGTGAGGTACTGTAGTTCAGAAACATCAAATTGGCATTCATTCACAGTATCATATCTCGTTGATTCATGTCGGTTTTCACCAGAAGAAGCTGCTTCAGCTTCTAAGCGTGTCAGCCTTGAAACTCGAGAAAAACCAGATTTGGTGATCAAGTTTTTAGAGAATCAAGGATTCTCACAAACCCAGATTTCTGGTTTCATAAGAGAAGTCCCAGCGTTTCTTCGATATGATCCTGAGAAGACCTTTCTCCCCAAAATTGAGTTTTTCAAATCCAGAGGCGTTTTGAGCTCAGACATCCCTAAGCTCATATCTAGTTGTCCTTCCGTCTTGAGAAGAAGCTTAAGGAACCAACTCATTCCTTCCTTTGATTTCTTTCGAGATTTGTTTAAATCTGATGACAAGTTCATTAAAGTTCTTAAAGATTACTCGGGCATTCTTCTTGATATTAACACGCATGCCGTACCTAATATAAGGGTATTAAGAGAAGTAGGAGTTCCTGAATCGAATGTTATAAAATTGTTACAATTTTTCCCTAGGACATTGACTAAAAATCCTGTTCGATTCAAGGGGATTGTTGTGGAAGTGATGGAAATGGGATTTAATCCTTTGACATTTAAATTTCTTATGGCTGTTTATGCGTTAGCATCACTAAGCAAGTCCACATGGGTGAAAAAGACTGATGCTTATAAAAAGTGGGATTGGTCTGACAATGACATCCTTGCAGCGTTTAGAAGGTCTCCATTCTGTATGAAAGTGTCAGAGGATAAGATTGATGCAGTAATGGAGTTTCTTGTTAACAAATTGGGCTTTGAATCTTCCAGTATTTCCAGATATCCAGTGCTGATGTCATTGAGCTTGAGTAAGCGGATTGTTCCGAGGGGTTCTGTCATTCAAGTTTTGTTAAAAAAGGGTCAGGTGAAAAAGGAAACCTTTCTTGCAGTATTTGCCTTTACTGAAAGGGTCTTTGTGAAGAGGGTTATCCTGCGTCATGAGAAGGAAGCTAATAAATTATTGAAGCTATATCAGGCTAAATTGAAGCTTGCAGGGAGGCTTCATAAAACCCTTGACCAGCTTGCTGTTAATGATCGTAACTTCTGTATTTTCATTCAAGGTTCTCCGGTCAAAGGGTCTGATGAACAAGCTGACCTAGTCCACAATGCTTGA 1455 0.4034 MLKGGPVDRETASSLTQEVQAVWPKAEEVDAWRDQEIKFPSDNIHQLVSSSFRHYLPEFLESMFCFLCKTIPFRRHIINRIFPTTFQELIFVQKLWVTVRYCSSETSNWHSFTVSYLVDSCRFSPEEAASASKRVSLETREKPDLVIKFLENQGFSQTQISGFIREVPAFLRYDPEKTFLPKIEFFKSRGVLSSDIPKLISSCPSVLRRSLRNQLIPSFDFFRDLFKSDDKFIKVLKDYSGILLDINTHAVPNIRVLREVGVPESNVIKLLQFFPRTLTKNPVRFKGIVVEVMEMGFNPLTFKFLMAVYALASLSKSTWVKKTDAYKKWDWSDNDILAAFRRSPFCMKVSEDKIDAVMEFLVNKLGFESSSISRYPVLMSLSLSKRIVPRGSVIQVLLKKGQVKKETFLAVFAFTERVFVKRVILRHEKEANKLLKLYQAKLKLAGRLHKTLDQLAVNDRNFCIFIQGSPVKGSDEQADLVHNA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1353 484 PANTHER CGI-12 PROTEIN-RELATED 110 428 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 FunFam Mitochondrial transcription termination factor-like 211 431 - -
Glsi04g1353 484 Pfam mTERF 313 419 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 Pfam mTERF 147 366 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 SMART mt_12 233 263 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 SMART mt_12 197 229 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 SMART mt_12 369 403 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 SMART mt_12 268 298 IPR003690 GO:0003690|GO:0006355
Glsi04g1353 484 Gene3D Transcription termination factor 3, mitochondrial 228 437 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1353 Glsi-ChrGlsi04 15490309 15493339 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi04g1353 mTERF 4.5e-25 No_clan