Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1348 ATGTTTAGTTTTCTCTGCAAAACCATCCCTTTTCGGGGGCATATAATGAACAACATTTCTCCAACAACACTTCAAGAACAGCTTTGTCTACAGAATCAACGGTTGTCTGTGACTGGGAGGTACTGTAGTTCGAACACATCAAATGGGCATTCTTTCACGGTCTCATATCTCATTAACACATGTGGGTTCTCACCAGAAGAAGCTGCTTCAGCTTCTAAGTATGTCAGTTTTGAAACTCGAGCAAAACCAGATTTGGTGATCAAGTTCTTGGAGAATCAAGGATTCTCACAAACCCAGATTTTTTTGTTCGTAAGAAACGACCCAAAGTTTCTTCGATATGATCCCGAGAAAACCTTTCTCCCTAAGATTGAGTTTTTAAAATCCAGAGGAGTTTTGAGTTCAGATATCCCTGCTGTCATATCTAGTTGCCCTTCTATCCTGAAGAGAAGTTTAAGGAACCAAATCATTCCTTCTTTTGATTACTTCCAAAATATGTTTCAATCTCGTGACAAACTCATTAAAGTTCTAAAAAGTTTCTCGGGAATTCTTCTTGATATCAACTCCATTGTCGTGCCTAATATGAAGCTATTAAAAGAAGTAGGTGTTCCTGAATCGAATGTTATCAAATTGATACAACTTTATCCCAGGGCATTGACTAAATCTACTGCTCGATTTAGGGAGATTGTGGAGGAAGTGAAAGAAATGGGGTTTAATCCTTTGAGGTTCAACTTTGTTATGGCTGTTTATGCATTGACATCATTAAGCAAATCCACATGGGCAAAAAAGGCTGATGTTTACAAAAAGTGGGGTTGGTCTGACAATGACATTGTTGCGGCATTTAGAAGGTATCCATACTGTATGAAGGCATCGGAGGATAAAATTGATGCACTAATGGAGTTTCTGGTTAACAATTTGGGCTGTGAATCTTCCGGTATTGCCAGATATCCAGTACTTCTTACATTGAGCTTGAATAAGCGAATTGTTCCACGGGGTTGTGTCATTCAAGTTCTGTTGTCAAAGAGTCTGGTGAAAAAGGAAAGATTGCTGGCGATATTTACCTACACAGAAAGGGTCTTTTTGGAGAGGTTTATTCTGTGTCATGAAAAGGAAGGTGGTGAACTATTGGAGCTGTATCAGGCTAAATTGGATCTTGCACGATGA 1161 0.3902 MFSFLCKTIPFRGHIMNNISPTTLQEQLCLQNQRLSVTGRYCSSNTSNGHSFTVSYLINTCGFSPEEAASASKYVSFETRAKPDLVIKFLENQGFSQTQIFLFVRNDPKFLRYDPEKTFLPKIEFLKSRGVLSSDIPAVISSCPSILKRSLRNQIIPSFDYFQNMFQSRDKLIKVLKSFSGILLDINSIVVPNMKLLKEVGVPESNVIKLIQLYPRALTKSTARFREIVEEVKEMGFNPLRFNFVMAVYALTSLSKSTWAKKADVYKKWGWSDNDIVAAFRRYPYCMKASEDKIDALMEFLVNNLGCESSGIARYPVLLTLSLNKRIVPRGCVIQVLLSKSLVKKERLLAIFTYTERVFLERFILCHEKEGGELLELYQAKLDLAR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1348 386 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 PANTHER CGI-12 PROTEIN-RELATED 48 368 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 Pfam mTERF 155 359 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 Pfam mTERF 87 180 IPR003690 GO:0003690|GO:0006355
Glsi04g1348 386 Gene3D Transcription termination factor 3, mitochondrial 186 371 IPR038538 -
Glsi04g1348 386 Gene3D Transcription termination factor 3, mitochondrial 50 185 IPR038538 -
Glsi04g1348 386 FunFam Mitochondrial transcription termination factor-like 151 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1348 Glsi-ChrGlsi04 15440702 15441862 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi04g1348 mTERF 1.3e-21 No_clan