Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1347 ATGGATTTGCCTCCACTAGGGTATCGATTTGCTCCCACTGATGGGGAACTAGTCTTCCATTACTTGGGAAACAAGGTGTTCGATAGGGAACTTCCTATTGACATCGTCAAAGAGATTGATGTCTACCAATATGATCCTGATCAGCTCCCACTTTGTGAGCATATTTATGCTAATGAGGAGGAGGAATATTACTTCACCACCACAAAGCCAATAGGTTCAGAAGGAACACCTACAGTTCGTACTACTCAACATGGTTATTGGAAGCAGACAGGAGATGATGAGACGGTAATGCACAACGAACAAACTGTTGGGCTGAAGAAAGATCTTGTCTTCTATTGGGGACAGTCACCAAATGGAGAACAAAGTCAGTGGGTCATAAGTGAATGCAGGCTTATTCCAAGTGGATTTGCACATGAACACTTTGATGCCAGCGTTCTTGCTAAGATAGAGAGCAGTGTAGTGTGTACACTTCGGAAAAGAGTGGGTGGAGATTACTCTACTCTTAGAGATGGATTGGAGAAATACCAGCCTAAAAGGAGATGGCACGGAAGAGAAAACCAAAAGAAATAG 570 0.4316 MDLPPLGYRFAPTDGELVFHYLGNKVFDRELPIDIVKEIDVYQYDPDQLPLCEHIYANEEEEYYFTTTKPIGSEGTPTVRTTQHGYWKQTGDDETVMHNEQTVGLKKDLVFYWGQSPNGEQSQWVISECRLIPSGFAHEHFDASVLAKIESSVVCTLRKRVGGDYSTLRDGLEKYQPKRRWHGRENQKK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1347 189 PANTHER NAC TRANSCRIPTION FACTOR 56 5 160 - -
Glsi04g1347 189 SUPERFAMILY NAC domain 4 148 IPR036093 GO:0003677|GO:0006355
Glsi04g1347 189 Gene3D NAC domain 13 162 IPR036093 GO:0003677|GO:0006355
Glsi04g1347 189 Pfam No apical meristem (NAM) protein 5 130 IPR003441 GO:0003677|GO:0006355
Glsi04g1347 189 ProSiteProfiles NAC domain profile. 4 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1347 Glsi-ChrGlsi04 15428660 15431895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1347 3 163 NAC Transcription Factor Family AT1G69490 37.267 2.44e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi04g1347 NAM 2.2e-22 No_clan