Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1346 ATGACTTTGTGGGATTTCCCAAGGCCTCCCACTGATAGGGCGTGGCTAAGGGGTTTTCATCTTCGCATCAAATTCCCAATCGATATCATCTTCATCAATTGGCGAGTTCCTTCTTCCGCCATTGCACTGCTCGAGTTTCTGGAATCCATGTTTTATTTTCTCTGGAAAACCATCCCTTTTCAGAGGCATATTTTCAACAACATTTCTCCATCAACATTGCAAGAACTGCTCTTTGTACAAAATCAATGGTTATCTGTGAGGTACTGTAGTTCAAACACATCAAATGGGCATTCTTTTACAGTCTCATATTTCGTTAATTCATGTGGGTTTTCACCAGAAGAAGCTGCTTCAGCTGCTAAGCGTGTCCGCTTTGAAACTCGAGAAAAACCAGATCTGGTGATCAAGTTCTTGGAGAATCAGGGATTCTCACGAACCCAGATTGTTTCGTTCGTAAAAAGCCAACCACATTTACTCCGATATGATCCTGATAAAACTTTTCTCCCTAAGATTGAGTTTTTCAAATCCAGAGGTGTTTTGAGTTCAGACATCCCTAGGCTTATATCTGGTTGCCCATCCATCCTGTCTAGAAGCTTAACGAACCAACTTATTCCTTCCTTTGATTTCTTTCGAAATTTGTTTCAATCTGATGACAAGGTCAATAAAGTTATTAAAGATTTCTCGGGCATTCTTCTTGATATTAACGCCCGCGCCGTGCCTAATATGAAGCTATTAAGAGAAGAAGGAGTTCCTGAACTGAATGTTATCAAATTGTTACAAATTTATCCCCGGACATTGACTAAAAATCATTGTCAATTTAAGGAGATTGTAGAGGAAGTGAAGGAAATGGGGTTTGATCCTTTGATGTTAAAATTTGTTATTGCTGTTTATGCGTTGACATCATTAAGCAAATCCATGTGGGAAAAAAAGGCTCATGTTTATAAAAAGTGGGGTTGGTCTGATAATGACATTGTTGAAGCATTTAAAAGGTTTCCATTCTGTATGAAGGTGTCAGAGGATAAGATTGATGCAGTAATGGAGTTTCTTGTTAACAAATGGGGCTGTGAATCCTCCACTATTGCTAGACATCCCGTACTGCTGTCAATGAGCTTGAATAAGCGAATGGTTCCAAGGGCTTCTGTCTTTGAAGTGTTGTTGTCAAAGGGTCAGGTGAAAAAGGAATCCTTGCTGATAATATTTTCCTGTAGCGAAAGGTTATTCTTGGAGAGGTTTATCATGCGTCACAAGAAGGAAGCTAGTGAACTATTGAAGCTGTATCAGGCTAAATTGGAGGTTGCAGGGTGA 1302 0.3963 MTLWDFPRPPTDRAWLRGFHLRIKFPIDIIFINWRVPSSAIALLEFLESMFYFLWKTIPFQRHIFNNISPSTLQELLFVQNQWLSVRYCSSNTSNGHSFTVSYFVNSCGFSPEEAASAAKRVRFETREKPDLVIKFLENQGFSRTQIVSFVKSQPHLLRYDPDKTFLPKIEFFKSRGVLSSDIPRLISGCPSILSRSLTNQLIPSFDFFRNLFQSDDKVNKVIKDFSGILLDINARAVPNMKLLREEGVPELNVIKLLQIYPRTLTKNHCQFKEIVEEVKEMGFDPLMLKFVIAVYALTSLSKSMWEKKAHVYKKWGWSDNDIVEAFKRFPFCMKVSEDKIDAVMEFLVNKWGCESSTIARHPVLLSMSLNKRMVPRASVFEVLLSKGQVKKESLLIIFSCSERLFLERFIMRHKKEASELLKLYQAKLEVAG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1346 433 Gene3D Transcription termination factor 3, mitochondrial 232 424 IPR038538 -
Glsi04g1346 433 Gene3D Transcription termination factor 3, mitochondrial 113 231 IPR038538 -
Glsi04g1346 433 FunFam Mitochondrial transcription termination factor-like 198 418 - -
Glsi04g1346 433 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Glsi04g1346 433 SMART mt_12 184 216 IPR003690 GO:0003690|GO:0006355
Glsi04g1346 433 SMART mt_12 356 390 IPR003690 GO:0003690|GO:0006355
Glsi04g1346 433 SMART mt_12 255 285 IPR003690 GO:0003690|GO:0006355
Glsi04g1346 433 SMART mt_12 324 355 IPR003690 GO:0003690|GO:0006355
Glsi04g1346 433 Pfam mTERF 235 406 IPR003690 GO:0003690|GO:0006355
Glsi04g1346 433 Pfam mTERF 134 286 IPR003690 GO:0003690|GO:0006355
Glsi04g1346 433 PANTHER CGI-12 PROTEIN-RELATED 95 416 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1346 Glsi-ChrGlsi04 15420937 15425679 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi04g1346 mTERF 2.2e-20 No_clan