Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1343 ATGTTTTGTTTTCTCTGCAAAACCGTCCCTTTTCGAAGGCATATTATCAGCAGCATCTGTCCATCAACACTAAGACAGCTGCTTTGTGTTCAAATCCAATGGTTATCTGTGAGGTACTGCAGTTCTAACACATCAAATGGGCATTCTTTTACAGTCTCATACCTCATTAATTTATGTGGGTTTTCACAAGAAGAAGCTGATTCAGCTTCTAAGCGTGTTAGCTTTGAAAGTCGAGAAAAACCGGATTTGGTGATCAAGTTCTTGGAGAATCAAGGATTCTCACAAACCCAGATTTTTGGTTTGGTCATTAAAGTTCTTAAAGAGTACGCGGGCATTCTTCTTGATATCAACACCCATGCCGTGCATAATATGAAGTTATTAAGAGAAGTAGGAGTTCCTGAATCCAATGTTATGACATTGTTAAAACTTTTTCCTAGGACATTGACTAAAAATCCTGTTCGATTTAAGGAGATTGTAAAGGAACTGACAGAAATGGGATTTAATCCTTTGAGGTTTAATTTTGTTTTGGCTATTAATGTATTGGCATCACTAAGCAAGTCCACATGGACCAAAAAGGCTGATGTTTATAAAAAGTGGGGTTGGTCTGACAATGACAATCTTGCAGCATTTGGAAGGTATCCATTCTGTATGAAGGCGTCGGAGGATAAGATTAATGCAGTAATGGAGTTTCTTGTTAACAAATTGGGATGTGAATCTTCCACTATTGCCACTTATCCAATAGTACTGGGAATGAGCTTGAATAAGCGAATTGTTCCAAGGGGTTCTGTCATTCAAGTTTTGTTGTCAAAGGGTCTGGTGGAAAAGGAAACCCTGATGGTATTATTTACCTATACTGAAAGTGTTTTTATGACAAGGTTTATTCTGCCTTATGAGAAGGAAGCTAGTGAATTATTGAAGTTGTACCAAGATAAATTGGATTTTGCAAGGGGAATGAAGACTAGTAGGGTTTTAAGGCATTAA 981 0.3751 MFCFLCKTVPFRRHIISSICPSTLRQLLCVQIQWLSVRYCSSNTSNGHSFTVSYLINLCGFSQEEADSASKRVSFESREKPDLVIKFLENQGFSQTQIFGLVIKVLKEYAGILLDINTHAVHNMKLLREVGVPESNVMTLLKLFPRTLTKNPVRFKEIVKELTEMGFNPLRFNFVLAINVLASLSKSTWTKKADVYKKWGWSDNDNLAAFGRYPFCMKASEDKINAVMEFLVNKLGCESSTIATYPIVLGMSLNKRIVPRGSVIQVLLSKGLVEKETLMVLFTYTESVFMTRFILPYEKEASELLKLYQDKLDFARGMKTSRVLRH 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1343 326 FunFam Mitochondrial transcription termination factor-like 93 301 - -
Glsi04g1343 326 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Glsi04g1343 326 SMART mt_12 239 273 IPR003690 GO:0003690|GO:0006355
Glsi04g1343 326 SMART mt_12 138 168 IPR003690 GO:0003690|GO:0006355
Glsi04g1343 326 Pfam mTERF 52 289 IPR003690 GO:0003690|GO:0006355
Glsi04g1343 326 PANTHER CGI-12 PROTEIN-RELATED 46 102 IPR003690 GO:0003690|GO:0006355
Glsi04g1343 326 Gene3D Transcription termination factor 3, mitochondrial 47 307 IPR038538 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi04g1343 Glsi-ChrGlsi04 15375351 15376536 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi04g1343 mTERF 2.8e-22 No_clan