Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1322 ATGGCTTCCTCTCATCATCTCCTCATTTTGCTTCTCACCTTTTCCTTCGCATCAGTTGTCAGAGCCGCTCTACCACAATCTGAAGTGCAAGCTCTGGAAGACATTGCCAACACACTTGGGAAGAAGGATTGGGACTTCCAGGTAGATCCATGCAGTGGAGCAGGAAACTGGAATATAAGCGAAGAAGAAAATGCTGTTAAATGCAATTGCTCTATTGCCAATGACAACTTCTGCCATGTTGTTAGCATAGTCCTGAAAAGACAAAATCTTCCCGGCGAACTCCCACCGGAACTAGTCAGGTTGCCTTATCTCCAAGAAATTGACCTCACCCTCAACTACCTTAACGGTACAATCCCTCAACAATGGGGCTCCATGATGAATCTTGTCAGCATTTCTGTTCTTGGAAACCGACTTACGGGTCCAATACCAGAGGAGCTAGGAAACATCAGCACTCTCAAAAGTTTGGTCCTCGAGTTCAATCAATTTTCTGGAAATCTTCCTCCGGCGCTTGGGAATCTTACCAACATTGAAAGACTGCTTCTTACCTCCAATAACTTCACCGGAGAACTACCTTTGACATTTGCAAGGCTTACTGCATTGAAACAAGTAACAATTCGAGGGAGTGGTTTGAGTGGACCAATTCCTTCTGAAATTTTTTTTCTGGAAAACTTAACTGACTTGAGGATAAGTGACTTGAATGGATCTGATTCAACTTTTCCACTGCTTAACAATAGGACAAAGTTGGAAACATTGATACTTAAGAGTTGCAATATTAATGGAACGCTACCTGAAAATCTTGGGAACATGTCCAATTTAAATACCTTGGATCTCTCATATAACAATTTCACTGACGAAAACTCAGGGCAGCAAGATTGTCAGACAGGAAAAGTAGGAACTATTACTTGTGTGGAAAGCACTGTCTGTCCTAACATGGTGTACTCTTTACACATAAATTGTGGTGGAAAGGCAAAAACCATTGGAGATACAACATATGAGGATGATTCAGATCTAGGTGGACCGGCAACATTCAAAAAGGGTGGAACAAACTGGGCATTCAGCAGTACTGGTCACTTTTTGGATAATCATACAGACTACCATATTTCACGCAATATATCTAGGCTCTTTATGCCCAATGTTGAATTGTACACGGATGCTCGTCCTTCTCCCAATTCTTTGACTTATTACGGATTTTGCCTGGGAAATGGACAGTACACAGTGAATCTACATTTTGCAGAGATAATGTTCACCAATGATAGTACATATGGCAGCCTTGGAAGGCGTGTATTTGACGTCTACATTCAGGGAAAGCAAATGCTGAAGGATTTCAATATTGCAAATGCAGCAGGAGGAGTTGGTTGCTCATGTATAATATATTATATAGAAAATCGAAGTATATCTGCAGGGGCTATTGTTGCGATTGTGGTTGCAGGAGTGATTATTGTCATCCTGTTATCTGGTATACTTTGTGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTCAGTGGAAGGAGTAACACCATTCGACGGCAAAAGGAAGACTGTTTGCATCTTCTTGATTGGGCTCATTTCTTGAAAGAGAATGGTGATCTAATGGAGCTAGTTGATAGAAGGTTGGGTTCAGACTTTAACAAAGAACAGGTCATGGTGATGATCAATGTGTCTCTCCTATGCACCAATGCCTCTTCATCACTTAGGCCCTCCATGTCTTCAGTGCTAAGCATGCTTGAAGGCAGAACTGTGGTTCCAGAGTTGATTTCAGATCAAAGTGAGGTAGCAGATAACATGAAGATGGAGGCAATGCGACAGTTCTACCAAGAGATAGAAGAAAATCAGATAAGTGAGGCTGACACTCAGACTAAAAGTCTTATAGGGCCGTCAACTGGTTCATCCACATCAGCTGCAGATCTTTATCCTGTTCGCCTGGATTCTTCTTACTGGGAGAAAAGAAGTTAG 2010 0.4164 MASSHHLLILLLTFSFASVVRAALPQSEVQALEDIANTLGKKDWDFQVDPCSGAGNWNISEEENAVKCNCSIANDNFCHVVSIVLKRQNLPGELPPELVRLPYLQEIDLTLNYLNGTIPQQWGSMMNLVSISVLGNRLTGPIPEELGNISTLKSLVLEFNQFSGNLPPALGNLTNIERLLLTSNNFTGELPLTFARLTALKQVTIRGSGLSGPIPSEIFFLENLTDLRISDLNGSDSTFPLLNNRTKLETLILKSCNINGTLPENLGNMSNLNTLDLSYNNFTDENSGQQDCQTGKVGTITCVESTVCPNMVYSLHINCGGKAKTIGDTTYEDDSDLGGPATFKKGGTNWAFSSTGHFLDNHTDYHISRNISRLFMPNVELYTDARPSPNSLTYYGFCLGNGQYTVNLHFAEIMFTNDSTYGSLGRRVFDVYIQGKQMLKDFNIANAAGGVGCSCIIYYIENRSISAGAIVAIVVAGVIIVILLSGILCGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTIRRQKEDCLHLLDWAHFLKENGDLMELVDRRLGSDFNKEQVMVMINVSLLCTNASSSLRPSMSSVLSMLEGRTVVPELISDQSEVADNMKMEAMRQFYQEIEENQISEADTQTKSLIGPSTGSSTSAADLYPVRLDSSYWEKRS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1322 669 MobiDBLite consensus disorder prediction 634 654 - -
Glsi04g1322 669 Gene3D Ribonuclease Inhibitor 192 300 IPR032675 -
Glsi04g1322 669 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 30 190 - -
Glsi04g1322 669 SUPERFAMILY L domain-like 70 285 - -
Glsi04g1322 669 Gene3D Transferase(Phosphotransferase) domain 1 477 621 - -
Glsi04g1322 669 SUPERFAMILY Protein kinase-like (PK-like) 490 616 IPR011009 -
Glsi04g1322 669 Gene3D Ribonuclease Inhibitor 26 191 IPR032675 -
Glsi04g1322 669 Pfam Protein tyrosine and serine/threonine kinase 490 592 IPR001245 GO:0004672|GO:0006468
Glsi04g1322 669 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 458 - -
Glsi04g1322 669 Gene3D - 311 475 - -
Glsi04g1322 669 Pfam Malectin domain 314 458 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1322 Glsi-ChrGlsi04 14943152 14959041 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1322 490 626 Receptor kinase-like Gene Family AT1G53420 51.773 4.48e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi04g1322 Malectin 5.4e-30 CL0202