Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1317 ATGGCTGGAGAGAACAATGAGCTTAGGGATTCTTGGCGGGCAACGGCCACAGAGGAAGAGGGATTCTCTAGTGTGTCACCAGAAATTTTTTGTGGTGACTTAGAGTTCAAGGATGATGATAAGTCTGAGTTGAGAAGAGCCAAAGAGAGATTTGATAAACTTAAATCGAAGGAAGAGCTAAAATATACACAAAAGATAGAAATTGAAGATCCTCTTACACCAAGAGTAAGAGTACATGAGAGTCTTCCACCAAGACTCCATGGGAGTCTTCCTCTAAGCATCAGTAGTCAAGTGAGAAGAAGAAGAAGTGAGAGGGTTGGAAGTGAGAAAGAAGAAGGGGTTTCTGACCCTTTTCTTCTTGTGCCAGCCTTTCAGTCTCTCCACATAAATTGTGGTGGAAAGGAAAAAACCATTGGAGATACAAAATATGATGATGATTCAGATCCAGCAGGACCGGCAACATACAAAAAGTGGGGAACAAACTGGGCCTTCAGCAGTACTGGTCACTTTTTGGATAATGACTCCACCCTCTACATTTCACACAATATATCCAGGCTCTCTATGCCCAATGTTGAATTGTATACAGATGCACGTCTTTCTCCCAGTTCTCTGACTTATTATGGATTTTGCTTGCGAAACGGACAATACACAGTGAAGCTACATTTTGCAGAGATAATGTTCACTAATGATAATACATATAGCAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGAATGTCCAGAATCTATATTTAAAACCTGAAGCCAGTAATCATCATGAAGCCATTTCGGATTGGATTGAAATATTGCAGGAAAAGCGAATGCTGAAGGATTTTAATATTGCAAATGAAGCAGGAGGAGTTGGTATGGAAGTCATTAAAGAATTCTCTGCTTCTGTGACTAAAAAGACATTAGAGATTCGCTTCTATTGGGCTGGAAAAGGGACAACTGCTATTCCAAATAAATCAGTATATGGTCCTCTAATATCAGCTATATCTGTCAATCATGGGGCTATTGTTGCAATTGTGGCTGCAGGAGTGATTATAGTCATCCTGTTATCTGGTATACTATGGTGGAGAGGCTGTCTAGAAAATAGAAGTTTGTTAGCAAGAGAGCTAAAGGATTTAGATCTGCAAACTGGTTTATTTACCTTAAGGCAAATCAAAGCAGCAACAAATAACTTCGATATATCCAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGTGCCATTTAACTCTGGATTGGCCAACAAGGCACAAGATTTGTGTTGGTATTGCCAGAGGTTTGGCTTTCCTTCATGAAGAATCAAGACTAAAGATTGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTTGACAAAGACCTGAATGCAAAAATATCTGATTTTGGTTTGGCTAAGCTTCACGAAGAGGACAATACCCACATAAGCACTCGAATAGCTGGGACCTATGGATATATGGCTCCAGAATATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATGATCAGTGGAAGGAGTAACACCGTTCGACGGCAAAAGGAAGACTGTTTCCATCTTCTTGATTGGGCTCATTACTTGAAAGAGAATGGCGATCTAATGGAGCTAGTTGATCGAAGGTTGGGTTCAGATTTTAACAAAGAACAGGTCATGGTGATGATCAATGTGGCTCTCCTATGCACCAATGCCTCTTCATCACTTAGGCCCTCCATGTCTTCAGTGCTGAGCATGCTTGAAGGCAGAACTGTGGTTCCAGAGTTGATTTCAGATCAAAGTGAGGTAGCAGATAAGATGAAGATGGAGGCAATGCGACAATTTTACCAAGAGATAGAAGAAAATCAGATAAGTGAGGCTGACACTCAGACTAAAAGTCTCATAGGGCCGTCAACTGGTTCATCCACATCAGCTGCAGATCTTTATCCTGTTCGCCTGAATTCTTCTTACTGGGAGAAAAGAAGTTAG 2007 0.4086 MAGENNELRDSWRATATEEEGFSSVSPEIFCGDLEFKDDDKSELRRAKERFDKLKSKEELKYTQKIEIEDPLTPRVRVHESLPPRLHGSLPLSISSQVRRRRSERVGSEKEEGVSDPFLLVPAFQSLHINCGGKEKTIGDTKYDDDSDPAGPATYKKWGTNWAFSSTGHFLDNDSTLYISHNISRLSMPNVELYTDARLSPSSLTYYGFCLRNGQYTVKLHFAEIMFTNDNTYSSLGRRVFDVYIQNVQNLYLKPEASNHHEAISDWIEILQEKRMLKDFNIANEAGGVGMEVIKEFSASVTKKTLEIRFYWAGKGTTAIPNKSVYGPLISAISVNHGAIVAIVAAGVIIVILLSGILWWRGCLENRSLLARELKDLDLQTGLFTLRQIKAATNNFDISNKIGEGGFGPVYKCHLTLDWPTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLHEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEMISGRSNTVRRQKEDCFHLLDWAHYLKENGDLMELVDRRLGSDFNKEQVMVMINVALLCTNASSSLRPSMSSVLSMLEGRTVVPELISDQSEVADKMKMEAMRQFYQEIEENQISEADTQTKSLIGPSTGSSTSAADLYPVRLNSSYWEKRS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1317 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Glsi04g1317 668 MobiDBLite consensus disorder prediction 80 110 - -
Glsi04g1317 668 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 414 625 - -
Glsi04g1317 668 SMART serkin_6 396 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1317 668 Coils Coil 37 57 - -
Glsi04g1317 668 MobiDBLite consensus disorder prediction 1 24 - -
Glsi04g1317 668 Gene3D Transferase(Phosphotransferase) domain 1 410 624 - -
Glsi04g1317 668 MobiDBLite consensus disorder prediction 632 653 - -
Glsi04g1317 668 Gene3D - 126 340 - -
Glsi04g1317 668 SUPERFAMILY Protein kinase-like (PK-like) 379 615 IPR011009 -
Glsi04g1317 668 Pfam Malectin domain 271 333 IPR021720 -
Glsi04g1317 668 Pfam Malectin domain 126 248 IPR021720 -
Glsi04g1317 668 ProSiteProfiles Protein kinase domain profile. 315 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1317 668 Pfam Protein tyrosine and serine/threonine kinase 419 592 IPR001245 GO:0004672|GO:0006468
Glsi04g1317 668 FunFam Putative LRR receptor-like serine/threonine-protein kinase 406 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1317 Glsi-ChrGlsi04 14772230 14778384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1317 399 653 Receptor kinase-like Gene Family AT1G07650 59.766 6.08e-92 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi04g1317 PK_Tyr_Ser-Thr 2.6e-26 CL0016